Gene : Bradi1g78180 B. distachyon v3.1
Defline:  (1 of 1) PF01062 - Bestrophin, RFP-TM, chloride channel (Bestrophin) Genomic Order:  9821
Name:  ? Bradi1g78180 Secondary Identifier:  ? PAC:32797504
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g78180 0.5kb upstream 0.5kb upstream 3649 true Bd1: 74489650-74493298 Brachypodium distachyon
Bradi1g78180 0.5kb upstream 0.5kb upstream 500 false Bd1: 74489650-74490149 Brachypodium distachyon
Bradi1g78180 0.5kb downstream 0.5kb downstream 3649 true Bd1: 74490150-74493798 Brachypodium distachyon
Bradi1g78180 0.5kb downstream 0.5kb downstream 500 false Bd1: 74493299-74493798 Brachypodium distachyon
Bradi1g78180 1.0kb upstream 1.0kb upstream 4149 true Bd1: 74489150-74493298 Brachypodium distachyon
Bradi1g78180 1.0kb upstream 1.0kb upstream 1000 false Bd1: 74489150-74490149 Brachypodium distachyon
Bradi1g78180 1.0kb downstream 1.0kb downstream 4149 true Bd1: 74490150-74494298 Brachypodium distachyon
Bradi1g78180 1.0kb downstream 1.0kb downstream 1000 false Bd1: 74493299-74494298 Brachypodium distachyon
Bradi1g78180 2.0kb upstream 2.0kb upstream 5149 true Bd1: 74488150-74493298 Brachypodium distachyon
Bradi1g78180 2.0kb upstream 2.0kb upstream 2000 false Bd1: 74488150-74490149 Brachypodium distachyon
Bradi1g78180 2.0kb downstream 2.0kb downstream 5149 true Bd1: 74490150-74495298 Brachypodium distachyon
Bradi1g78180 2.0kb downstream 2.0kb downstream 2000 false Bd1: 74493299-74495298 Brachypodium distachyon
Bradi1g78180 5.0kb upstream 5.0kb upstream 8149 true Bd1: 74485150-74493298 Brachypodium distachyon
Bradi1g78180 5.0kb upstream 5.0kb upstream 5000 false Bd1: 74485150-74490149 Brachypodium distachyon
Bradi1g78180 5.0kb downstream 5.0kb downstream 8149 true Bd1: 74490150-74498298 Brachypodium distachyon
Bradi1g78180 5.0kb downstream 5.0kb downstream 5000 false Bd1: 74493299-74498298 Brachypodium distachyon
Bradi1g78180 10.0kb upstream 10.0kb upstream 13149 true Bd1: 74480150-74493298 Brachypodium distachyon
Bradi1g78180 10.0kb upstream 10.0kb upstream 10000 false Bd1: 74480150-74490149 Brachypodium distachyon
Bradi1g78180 10.0kb downstream 10.0kb downstream 13149 true Bd1: 74490150-74503298 Brachypodium distachyon
Bradi1g78180 10.0kb downstream 10.0kb downstream 10000 false Bd1: 74493299-74503298 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573559 5269 Grass View MSA
122051206 5273 Angiosperm View MSA
121349752 5274 Embryophyte View MSA
123427884 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.879       Low
cufflinks 21.189     High  
cufflinks 20.637     High  
cufflinks 22.187     High  
cufflinks 9.561     High  
cufflinks 14.13     High  
cufflinks 17.99     High  
cufflinks 17.965     High  
cufflinks 17.126     High  
cufflinks 11.91     High  
cufflinks 26.625     High High
cufflinks 12.258     High  
cufflinks 16.183     High  
cufflinks 22.812     High  
cufflinks 8.944     High  
cufflinks 13.335     High  
cufflinks 13.745     High  
cufflinks 2.454       Low
cufflinks 27.23     High High
cufflinks 15.689     High  
cufflinks 19.096     High  
cufflinks 15.049     High  
cufflinks 22.519     High  
cufflinks 18.205     High  
cufflinks 16.28     High  
cufflinks 18.56     High  
cufflinks 18.82     High  
cufflinks 19.827     High  
cufflinks 18.899     High  
cufflinks 15.391     High  

0 Strain