Gene : Bradi1g78440 B. distachyon v3.1
Defline:  (1 of 55) PTHR10799 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED Genomic Order:  9852
Name:  ? Bradi1g78440 Secondary Identifier:  ? PAC:32797824
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g78440 0.5kb upstream 0.5kb upstream 6257 true Bd1: 74654712-74660968 Brachypodium distachyon
Bradi1g78440 0.5kb upstream 0.5kb upstream 500 false Bd1: 74660469-74660968 Brachypodium distachyon
Bradi1g78440 0.5kb downstream 0.5kb downstream 6257 true Bd1: 74654212-74660468 Brachypodium distachyon
Bradi1g78440 0.5kb downstream 0.5kb downstream 500 false Bd1: 74654212-74654711 Brachypodium distachyon
Bradi1g78440 1.0kb upstream 1.0kb upstream 6757 true Bd1: 74654712-74661468 Brachypodium distachyon
Bradi1g78440 1.0kb upstream 1.0kb upstream 1000 false Bd1: 74660469-74661468 Brachypodium distachyon
Bradi1g78440 1.0kb downstream 1.0kb downstream 6757 true Bd1: 74653712-74660468 Brachypodium distachyon
Bradi1g78440 1.0kb downstream 1.0kb downstream 1000 false Bd1: 74653712-74654711 Brachypodium distachyon
Bradi1g78440 2.0kb upstream 2.0kb upstream 7757 true Bd1: 74654712-74662468 Brachypodium distachyon
Bradi1g78440 2.0kb upstream 2.0kb upstream 2000 false Bd1: 74660469-74662468 Brachypodium distachyon
Bradi1g78440 2.0kb downstream 2.0kb downstream 7757 true Bd1: 74652712-74660468 Brachypodium distachyon
Bradi1g78440 2.0kb downstream 2.0kb downstream 2000 false Bd1: 74652712-74654711 Brachypodium distachyon
Bradi1g78440 5.0kb upstream 5.0kb upstream 10757 true Bd1: 74654712-74665468 Brachypodium distachyon
Bradi1g78440 5.0kb upstream 5.0kb upstream 5000 false Bd1: 74660469-74665468 Brachypodium distachyon
Bradi1g78440 5.0kb downstream 5.0kb downstream 10757 true Bd1: 74649712-74660468 Brachypodium distachyon
Bradi1g78440 5.0kb downstream 5.0kb downstream 5000 false Bd1: 74649712-74654711 Brachypodium distachyon
Bradi1g78440 10.0kb upstream 10.0kb upstream 15757 true Bd1: 74654712-74670468 Brachypodium distachyon
Bradi1g78440 10.0kb upstream 10.0kb upstream 10000 false Bd1: 74660469-74670468 Brachypodium distachyon
Bradi1g78440 10.0kb downstream 10.0kb downstream 15757 true Bd1: 74644712-74660468 Brachypodium distachyon
Bradi1g78440 10.0kb downstream 10.0kb downstream 10000 false Bd1: 74644712-74654711 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026277 5273 Angiosperm View MSA
124570567 5269 Grass View MSA
121347907 5274 Embryophyte View MSA
123380672 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.792        
cufflinks 2.063        
cufflinks 1.958        
cufflinks 1.687        
cufflinks 0.657       Low
cufflinks 1.906        
cufflinks 1.646        
cufflinks 1.611        
cufflinks 1.8        
cufflinks 0.916        
cufflinks 2.067        
cufflinks 2.021        
cufflinks 1.878        
cufflinks 1.483        
cufflinks 1.056        
cufflinks 1.945        
cufflinks 0.61       Low
cufflinks 2.434       High
cufflinks 0.521       Low
cufflinks 0.241       Low
cufflinks 0.82        
cufflinks 1.925        
cufflinks 1.68        
cufflinks 1.507        
cufflinks 1.337        
cufflinks 1.603        
cufflinks 1.621        
cufflinks 1.366        
cufflinks 1.317        
cufflinks 1.497        

0 Strain