Gene : Bradi1g78620 B. distachyon v3.1
Defline:  (1 of 1) K10848 - DNA excision repair protein ERCC-4 (ERCC4, XPF) Genomic Order:  9872
Name:  ? Bradi1g78620 Secondary Identifier:  ? PAC:32795388
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g78620 0.5kb upstream 0.5kb upstream 5027 true Bd1: 74787921-74792947 Brachypodium distachyon
Bradi1g78620 0.5kb upstream 0.5kb upstream 500 false Bd1: 74792448-74792947 Brachypodium distachyon
Bradi1g78620 0.5kb downstream 0.5kb downstream 5027 true Bd1: 74787421-74792447 Brachypodium distachyon
Bradi1g78620 0.5kb downstream 0.5kb downstream 500 false Bd1: 74787421-74787920 Brachypodium distachyon
Bradi1g78620 1.0kb upstream 1.0kb upstream 5527 true Bd1: 74787921-74793447 Brachypodium distachyon
Bradi1g78620 1.0kb upstream 1.0kb upstream 1000 false Bd1: 74792448-74793447 Brachypodium distachyon
Bradi1g78620 1.0kb downstream 1.0kb downstream 5527 true Bd1: 74786921-74792447 Brachypodium distachyon
Bradi1g78620 1.0kb downstream 1.0kb downstream 1000 false Bd1: 74786921-74787920 Brachypodium distachyon
Bradi1g78620 2.0kb upstream 2.0kb upstream 6527 true Bd1: 74787921-74794447 Brachypodium distachyon
Bradi1g78620 2.0kb upstream 2.0kb upstream 2000 false Bd1: 74792448-74794447 Brachypodium distachyon
Bradi1g78620 2.0kb downstream 2.0kb downstream 6527 true Bd1: 74785921-74792447 Brachypodium distachyon
Bradi1g78620 2.0kb downstream 2.0kb downstream 2000 false Bd1: 74785921-74787920 Brachypodium distachyon
Bradi1g78620 5.0kb upstream 5.0kb upstream 9527 true Bd1: 74787921-74797447 Brachypodium distachyon
Bradi1g78620 5.0kb upstream 5.0kb upstream 5000 false Bd1: 74792448-74797447 Brachypodium distachyon
Bradi1g78620 5.0kb downstream 5.0kb downstream 9527 true Bd1: 74782921-74792447 Brachypodium distachyon
Bradi1g78620 5.0kb downstream 5.0kb downstream 5000 false Bd1: 74782921-74787920 Brachypodium distachyon
Bradi1g78620 10.0kb upstream 10.0kb upstream 14527 true Bd1: 74787921-74802447 Brachypodium distachyon
Bradi1g78620 10.0kb upstream 10.0kb upstream 10000 false Bd1: 74792448-74802447 Brachypodium distachyon
Bradi1g78620 10.0kb downstream 10.0kb downstream 14527 true Bd1: 74777921-74792447 Brachypodium distachyon
Bradi1g78620 10.0kb downstream 10.0kb downstream 10000 false Bd1: 74777921-74787920 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026556 5273 Angiosperm View MSA
124575342 5269 Grass View MSA
121346199 5274 Embryophyte View MSA
123424869 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.762       Low
cufflinks 3.568        
cufflinks 4.873        
cufflinks 3.139        
cufflinks 2.137        
cufflinks 3.083        
cufflinks 2.907        
cufflinks 3.328        
cufflinks 3.413        
cufflinks 3.208        
cufflinks 4.64        
cufflinks 3.493        
cufflinks 2.799        
cufflinks 2.835        
cufflinks 2.314        
cufflinks 3.092        
cufflinks 2.242        
cufflinks 6.066       High
cufflinks 5.294       High
cufflinks 3.994        
cufflinks 3.09        
cufflinks 5.364       High
cufflinks 3.311        
cufflinks 2.493        
cufflinks 2.487        
cufflinks 4.04        
cufflinks 3.372        
cufflinks 4.592        
cufflinks 5.197       High
cufflinks 3.296        

0 Strain