Gene : Bradi1g78660 B. distachyon v3.1
Defline:  (1 of 1) PTHR12599//PTHR12599:SF8 - PTERIN-4-ALPHA-CARBINOLAMINE DEHYDRATASE Genomic Order:  9876
Name:  ? Bradi1g78660 Secondary Identifier:  ? PAC:32797681
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g78660 0.5kb upstream 0.5kb upstream 1774 true Bd1: 74801186-74802959 Brachypodium distachyon
Bradi1g78660 0.5kb upstream 0.5kb upstream 500 false Bd1: 74801186-74801685 Brachypodium distachyon
Bradi1g78660 0.5kb downstream 0.5kb downstream 1774 true Bd1: 74801686-74803459 Brachypodium distachyon
Bradi1g78660 0.5kb downstream 0.5kb downstream 500 false Bd1: 74802960-74803459 Brachypodium distachyon
Bradi1g78660 1.0kb upstream 1.0kb upstream 2274 true Bd1: 74800686-74802959 Brachypodium distachyon
Bradi1g78660 1.0kb upstream 1.0kb upstream 1000 false Bd1: 74800686-74801685 Brachypodium distachyon
Bradi1g78660 1.0kb downstream 1.0kb downstream 2274 true Bd1: 74801686-74803959 Brachypodium distachyon
Bradi1g78660 1.0kb downstream 1.0kb downstream 1000 false Bd1: 74802960-74803959 Brachypodium distachyon
Bradi1g78660 2.0kb upstream 2.0kb upstream 3274 true Bd1: 74799686-74802959 Brachypodium distachyon
Bradi1g78660 2.0kb upstream 2.0kb upstream 2000 false Bd1: 74799686-74801685 Brachypodium distachyon
Bradi1g78660 2.0kb downstream 2.0kb downstream 3274 true Bd1: 74801686-74804959 Brachypodium distachyon
Bradi1g78660 2.0kb downstream 2.0kb downstream 2000 false Bd1: 74802960-74804959 Brachypodium distachyon
Bradi1g78660 5.0kb upstream 5.0kb upstream 6274 true Bd1: 74796686-74802959 Brachypodium distachyon
Bradi1g78660 5.0kb upstream 5.0kb upstream 5000 false Bd1: 74796686-74801685 Brachypodium distachyon
Bradi1g78660 5.0kb downstream 5.0kb downstream 6274 true Bd1: 74801686-74807959 Brachypodium distachyon
Bradi1g78660 5.0kb downstream 5.0kb downstream 5000 false Bd1: 74802960-74807959 Brachypodium distachyon
Bradi1g78660 10.0kb upstream 10.0kb upstream 11274 true Bd1: 74791686-74802959 Brachypodium distachyon
Bradi1g78660 10.0kb upstream 10.0kb upstream 10000 false Bd1: 74791686-74801685 Brachypodium distachyon
Bradi1g78660 10.0kb downstream 10.0kb downstream 11274 true Bd1: 74801686-74812959 Brachypodium distachyon
Bradi1g78660 10.0kb downstream 10.0kb downstream 10000 false Bd1: 74802960-74812959 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577869 5269 Grass View MSA
122046446 5273 Angiosperm View MSA
121348467 5274 Embryophyte View MSA
123427509 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 174.49     High  
cufflinks 223.252     High  
cufflinks 223.495     High  
cufflinks 323.792     High  
cufflinks 195.477     High  
cufflinks 177.455     High  
cufflinks 223.63     High  
cufflinks 252.894     High  
cufflinks 190.209     High  
cufflinks 321.246     High  
cufflinks 73.476     High  
cufflinks 185.056     High  
cufflinks 130.638     High  
cufflinks 109.684     High  
cufflinks 258.795     High  
cufflinks 152.445     High  
cufflinks 238.738     High  
cufflinks 9.073       Low
cufflinks 187.174     High  
cufflinks 63.626     High Low
cufflinks 130.516     High  
cufflinks 187.94     High  
cufflinks 251.672     High  
cufflinks 183.552     High  
cufflinks 207.833     High  
cufflinks 247.664     High  
cufflinks 96.193     High  
cufflinks 302.502     High  
cufflinks 279.08     High  
cufflinks 145.299     High  

0 Strain