Gene : Bradi2g00240 B. distachyon v3.1
Defline:  (1 of 3) PTHR11802//PTHR11802:SF106 - SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE // SUBFAMILY NOT NAMED Genomic Order:  8
Name:  ? Bradi2g00240 Secondary Identifier:  ? PAC:32779214
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g00240 0.5kb upstream 0.5kb upstream 3157 true Bd2: 26599-29755 Brachypodium distachyon
Bradi2g00240 0.5kb upstream 0.5kb upstream 500 false Bd2: 29256-29755 Brachypodium distachyon
Bradi2g00240 0.5kb downstream 0.5kb downstream 3157 true Bd2: 26099-29255 Brachypodium distachyon
Bradi2g00240 0.5kb downstream 0.5kb downstream 500 false Bd2: 26099-26598 Brachypodium distachyon
Bradi2g00240 1.0kb upstream 1.0kb upstream 3657 true Bd2: 26599-30255 Brachypodium distachyon
Bradi2g00240 1.0kb upstream 1.0kb upstream 1000 false Bd2: 29256-30255 Brachypodium distachyon
Bradi2g00240 1.0kb downstream 1.0kb downstream 3657 true Bd2: 25599-29255 Brachypodium distachyon
Bradi2g00240 1.0kb downstream 1.0kb downstream 1000 false Bd2: 25599-26598 Brachypodium distachyon
Bradi2g00240 2.0kb upstream 2.0kb upstream 4657 true Bd2: 26599-31255 Brachypodium distachyon
Bradi2g00240 2.0kb upstream 2.0kb upstream 2000 false Bd2: 29256-31255 Brachypodium distachyon
Bradi2g00240 2.0kb downstream 2.0kb downstream 4657 true Bd2: 24599-29255 Brachypodium distachyon
Bradi2g00240 2.0kb downstream 2.0kb downstream 2000 false Bd2: 24599-26598 Brachypodium distachyon
Bradi2g00240 5.0kb upstream 5.0kb upstream 7657 true Bd2: 26599-34255 Brachypodium distachyon
Bradi2g00240 5.0kb upstream 5.0kb upstream 5000 false Bd2: 29256-34255 Brachypodium distachyon
Bradi2g00240 5.0kb downstream 5.0kb downstream 7657 true Bd2: 21599-29255 Brachypodium distachyon
Bradi2g00240 5.0kb downstream 5.0kb downstream 5000 false Bd2: 21599-26598 Brachypodium distachyon
Bradi2g00240 10.0kb upstream 10.0kb upstream 12657 true Bd2: 26599-39255 Brachypodium distachyon
Bradi2g00240 10.0kb upstream 10.0kb upstream 10000 false Bd2: 29256-39255 Brachypodium distachyon
Bradi2g00240 10.0kb downstream 10.0kb downstream 12657 true Bd2: 16599-29255 Brachypodium distachyon
Bradi2g00240 10.0kb downstream 10.0kb downstream 10000 false Bd2: 16599-26598 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124589163 5269 Grass View MSA
122046217 5273 Angiosperm View MSA
121349139 5274 Embryophyte View MSA
123428424 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.013     Low  
cufflinks 0.029     Low High
cufflinks 0.021     Low  
cufflinks 0.014     Low  
cufflinks 0.02     Low  
cufflinks 0.016     Low  
cufflinks 0.007     Low Low
cufflinks 0.005     Low Low
cufflinks 0.009     Low  
cufflinks 0.032     Low High
cufflinks 0.007     Low Low
cufflinks 0.014     Low  
cufflinks 0.007     Low Low
cufflinks 0.008     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low  
cufflinks 0.008     Low Low
cufflinks 0.049     Low High
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.029     Low High
cufflinks 0.006     Low Low
cufflinks 0.013     Low  
cufflinks 0.01     Low  
cufflinks 0.015     Low  
cufflinks 0.019     Low  
cufflinks 0.014     Low  
cufflinks 0.037     Low High
cufflinks 0.01     Low  

0 Strain