Gene : Bradi5g08724 B. distachyon v3.1
Defline:  (1 of 55) PF02902 - Ulp1 protease family, C-terminal catalytic domain (Peptidase_C48) Genomic Order:  848
Name:  ? Bradi5g08724 Secondary Identifier:  ? PAC:32812009
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g08724 0.5kb upstream 0.5kb upstream 1235 true Bd5: 11748315-11749549 Brachypodium distachyon
Bradi5g08724 0.5kb upstream 0.5kb upstream 500 false Bd5: 11749050-11749549 Brachypodium distachyon
Bradi5g08724 0.5kb downstream 0.5kb downstream 1235 true Bd5: 11747815-11749049 Brachypodium distachyon
Bradi5g08724 0.5kb downstream 0.5kb downstream 500 false Bd5: 11747815-11748314 Brachypodium distachyon
Bradi5g08724 1.0kb upstream 1.0kb upstream 1735 true Bd5: 11748315-11750049 Brachypodium distachyon
Bradi5g08724 1.0kb upstream 1.0kb upstream 1000 false Bd5: 11749050-11750049 Brachypodium distachyon
Bradi5g08724 1.0kb downstream 1.0kb downstream 1735 true Bd5: 11747315-11749049 Brachypodium distachyon
Bradi5g08724 1.0kb downstream 1.0kb downstream 1000 false Bd5: 11747315-11748314 Brachypodium distachyon
Bradi5g08724 2.0kb upstream 2.0kb upstream 2735 true Bd5: 11748315-11751049 Brachypodium distachyon
Bradi5g08724 2.0kb upstream 2.0kb upstream 2000 false Bd5: 11749050-11751049 Brachypodium distachyon
Bradi5g08724 2.0kb downstream 2.0kb downstream 2735 true Bd5: 11746315-11749049 Brachypodium distachyon
Bradi5g08724 2.0kb downstream 2.0kb downstream 2000 false Bd5: 11746315-11748314 Brachypodium distachyon
Bradi5g08724 5.0kb upstream 5.0kb upstream 5735 true Bd5: 11748315-11754049 Brachypodium distachyon
Bradi5g08724 5.0kb upstream 5.0kb upstream 5000 false Bd5: 11749050-11754049 Brachypodium distachyon
Bradi5g08724 5.0kb downstream 5.0kb downstream 5735 true Bd5: 11743315-11749049 Brachypodium distachyon
Bradi5g08724 5.0kb downstream 5.0kb downstream 5000 false Bd5: 11743315-11748314 Brachypodium distachyon
Bradi5g08724 10.0kb upstream 10.0kb upstream 10735 true Bd5: 11748315-11759049 Brachypodium distachyon
Bradi5g08724 10.0kb upstream 10.0kb upstream 10000 false Bd5: 11749050-11759049 Brachypodium distachyon
Bradi5g08724 10.0kb downstream 10.0kb downstream 10735 true Bd5: 11738315-11749049 Brachypodium distachyon
Bradi5g08724 10.0kb downstream 10.0kb downstream 10000 false Bd5: 11738315-11748314 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124590402 5269 Grass View MSA
122048825 5273 Angiosperm View MSA
121351710 5274 Embryophyte View MSA
123427809 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.084     Low High
cufflinks 0.018     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain