Gene : Bradi1g74900 B. distachyon v3.1
Defline:  (1 of 1) PTHR22814//PTHR22814:SF143 - COPPER TRANSPORT PROTEIN ATOX1-RELATED Genomic Order:  9408
Name:  ? Bradi1g74900 Secondary Identifier:  ? PAC:32794446
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g74900 0.5kb upstream 0.5kb upstream 3855 true Bd1: 72173364-72177218 Brachypodium distachyon
Bradi1g74900 0.5kb upstream 0.5kb upstream 500 false Bd1: 72173364-72173863 Brachypodium distachyon
Bradi1g74900 0.5kb downstream 0.5kb downstream 3855 true Bd1: 72173864-72177718 Brachypodium distachyon
Bradi1g74900 0.5kb downstream 0.5kb downstream 500 false Bd1: 72177219-72177718 Brachypodium distachyon
Bradi1g74900 1.0kb upstream 1.0kb upstream 4355 true Bd1: 72172864-72177218 Brachypodium distachyon
Bradi1g74900 1.0kb upstream 1.0kb upstream 1000 false Bd1: 72172864-72173863 Brachypodium distachyon
Bradi1g74900 1.0kb downstream 1.0kb downstream 4355 true Bd1: 72173864-72178218 Brachypodium distachyon
Bradi1g74900 1.0kb downstream 1.0kb downstream 1000 false Bd1: 72177219-72178218 Brachypodium distachyon
Bradi1g74900 2.0kb upstream 2.0kb upstream 5355 true Bd1: 72171864-72177218 Brachypodium distachyon
Bradi1g74900 2.0kb upstream 2.0kb upstream 2000 false Bd1: 72171864-72173863 Brachypodium distachyon
Bradi1g74900 2.0kb downstream 2.0kb downstream 5355 true Bd1: 72173864-72179218 Brachypodium distachyon
Bradi1g74900 2.0kb downstream 2.0kb downstream 2000 false Bd1: 72177219-72179218 Brachypodium distachyon
Bradi1g74900 5.0kb upstream 5.0kb upstream 8355 true Bd1: 72168864-72177218 Brachypodium distachyon
Bradi1g74900 5.0kb upstream 5.0kb upstream 5000 false Bd1: 72168864-72173863 Brachypodium distachyon
Bradi1g74900 5.0kb downstream 5.0kb downstream 8355 true Bd1: 72173864-72182218 Brachypodium distachyon
Bradi1g74900 5.0kb downstream 5.0kb downstream 5000 false Bd1: 72177219-72182218 Brachypodium distachyon
Bradi1g74900 10.0kb upstream 10.0kb upstream 13355 true Bd1: 72163864-72177218 Brachypodium distachyon
Bradi1g74900 10.0kb upstream 10.0kb upstream 10000 false Bd1: 72163864-72173863 Brachypodium distachyon
Bradi1g74900 10.0kb downstream 10.0kb downstream 13355 true Bd1: 72173864-72187218 Brachypodium distachyon
Bradi1g74900 10.0kb downstream 10.0kb downstream 10000 false Bd1: 72177219-72187218 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577164 5269 Grass View MSA
122045466 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.518        
cufflinks 1.161        
cufflinks 0.994        
cufflinks 0.933        
cufflinks 2.211        
cufflinks 0.997        
cufflinks 1.231        
cufflinks 1.792        
cufflinks 0.886        
cufflinks 0.862        
cufflinks 2.365       High
cufflinks 2.961       High
cufflinks 0.994        
cufflinks 1.228        
cufflinks 3.681       High
cufflinks 1.583        
cufflinks 0.69       Low
cufflinks 0.967        
cufflinks 4.996       High
cufflinks 3.97       High
cufflinks 0.741        
cufflinks 1.131        
cufflinks 0.922        
cufflinks 0.822        
cufflinks 1.021        
cufflinks 0.977        
cufflinks 0.634       Low
cufflinks 1.085        
cufflinks 1.098        
cufflinks 0.977        

0 Strain