Gene : Bradi1g74940 B. distachyon v3.1
Defline:  (1 of 1) K14556 - U3 small nucleolar RNA-associated protein 12 (DIP2, UTP12, WDR3) Genomic Order:  9413
Name:  ? Bradi1g74940 Secondary Identifier:  ? PAC:32798046
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g74940 0.5kb upstream 0.5kb upstream 6559 true Bd1: 72200256-72206814 Brachypodium distachyon
Bradi1g74940 0.5kb upstream 0.5kb upstream 500 false Bd1: 72206315-72206814 Brachypodium distachyon
Bradi1g74940 0.5kb downstream 0.5kb downstream 6559 true Bd1: 72199756-72206314 Brachypodium distachyon
Bradi1g74940 0.5kb downstream 0.5kb downstream 500 false Bd1: 72199756-72200255 Brachypodium distachyon
Bradi1g74940 1.0kb upstream 1.0kb upstream 7059 true Bd1: 72200256-72207314 Brachypodium distachyon
Bradi1g74940 1.0kb upstream 1.0kb upstream 1000 false Bd1: 72206315-72207314 Brachypodium distachyon
Bradi1g74940 1.0kb downstream 1.0kb downstream 7059 true Bd1: 72199256-72206314 Brachypodium distachyon
Bradi1g74940 1.0kb downstream 1.0kb downstream 1000 false Bd1: 72199256-72200255 Brachypodium distachyon
Bradi1g74940 2.0kb upstream 2.0kb upstream 8059 true Bd1: 72200256-72208314 Brachypodium distachyon
Bradi1g74940 2.0kb upstream 2.0kb upstream 2000 false Bd1: 72206315-72208314 Brachypodium distachyon
Bradi1g74940 2.0kb downstream 2.0kb downstream 8059 true Bd1: 72198256-72206314 Brachypodium distachyon
Bradi1g74940 2.0kb downstream 2.0kb downstream 2000 false Bd1: 72198256-72200255 Brachypodium distachyon
Bradi1g74940 5.0kb upstream 5.0kb upstream 11059 true Bd1: 72200256-72211314 Brachypodium distachyon
Bradi1g74940 5.0kb upstream 5.0kb upstream 5000 false Bd1: 72206315-72211314 Brachypodium distachyon
Bradi1g74940 5.0kb downstream 5.0kb downstream 11059 true Bd1: 72195256-72206314 Brachypodium distachyon
Bradi1g74940 5.0kb downstream 5.0kb downstream 5000 false Bd1: 72195256-72200255 Brachypodium distachyon
Bradi1g74940 10.0kb upstream 10.0kb upstream 16059 true Bd1: 72200256-72216314 Brachypodium distachyon
Bradi1g74940 10.0kb upstream 10.0kb upstream 10000 false Bd1: 72206315-72216314 Brachypodium distachyon
Bradi1g74940 10.0kb downstream 10.0kb downstream 16059 true Bd1: 72190256-72206314 Brachypodium distachyon
Bradi1g74940 10.0kb downstream 10.0kb downstream 10000 false Bd1: 72190256-72200255 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568699 5269 Grass View MSA
122046155 5273 Angiosperm View MSA
121346306 5274 Embryophyte View MSA
123424601 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.502        
cufflinks 3.845       High
cufflinks 2.84        
cufflinks 2.992        
cufflinks 0.712       Low
cufflinks 3.386        
cufflinks 3.135        
cufflinks 2.139        
cufflinks 3.133        
cufflinks 1.411        
cufflinks 0.879       Low
cufflinks 2.331        
cufflinks 0.683       Low
cufflinks 0.754       Low
cufflinks 1.051        
cufflinks 3.568        
cufflinks 1.746        
cufflinks 7.159       High
cufflinks 1.723        
cufflinks 0.4       Low
cufflinks 2.106        
cufflinks 2.093        
cufflinks 2.047        
cufflinks 2.243        
cufflinks 2.916        
cufflinks 1.868        
cufflinks 1.202        
cufflinks 1.608        
cufflinks 1.779        
cufflinks 2.989        

0 Strain