Gene : Bradi1g75920 B. distachyon v3.1
Defline:  (1 of 1) PTHR13018//PTHR13018:SF52 - PROBABLE MEMBRANE PROTEIN DUF221-RELATED Genomic Order:  9532
Name:  ? Bradi1g75920 Secondary Identifier:  ? PAC:32805845
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g75920 0.5kb upstream 0.5kb upstream 3575 true Bd1: 72902704-72906278 Brachypodium distachyon
Bradi1g75920 0.5kb upstream 0.5kb upstream 500 false Bd1: 72905779-72906278 Brachypodium distachyon
Bradi1g75920 0.5kb downstream 0.5kb downstream 3575 true Bd1: 72902204-72905778 Brachypodium distachyon
Bradi1g75920 0.5kb downstream 0.5kb downstream 500 false Bd1: 72902204-72902703 Brachypodium distachyon
Bradi1g75920 1.0kb upstream 1.0kb upstream 4075 true Bd1: 72902704-72906778 Brachypodium distachyon
Bradi1g75920 1.0kb upstream 1.0kb upstream 1000 false Bd1: 72905779-72906778 Brachypodium distachyon
Bradi1g75920 1.0kb downstream 1.0kb downstream 4075 true Bd1: 72901704-72905778 Brachypodium distachyon
Bradi1g75920 1.0kb downstream 1.0kb downstream 1000 false Bd1: 72901704-72902703 Brachypodium distachyon
Bradi1g75920 2.0kb upstream 2.0kb upstream 5075 true Bd1: 72902704-72907778 Brachypodium distachyon
Bradi1g75920 2.0kb upstream 2.0kb upstream 2000 false Bd1: 72905779-72907778 Brachypodium distachyon
Bradi1g75920 2.0kb downstream 2.0kb downstream 5075 true Bd1: 72900704-72905778 Brachypodium distachyon
Bradi1g75920 2.0kb downstream 2.0kb downstream 2000 false Bd1: 72900704-72902703 Brachypodium distachyon
Bradi1g75920 5.0kb upstream 5.0kb upstream 8075 true Bd1: 72902704-72910778 Brachypodium distachyon
Bradi1g75920 5.0kb upstream 5.0kb upstream 5000 false Bd1: 72905779-72910778 Brachypodium distachyon
Bradi1g75920 5.0kb downstream 5.0kb downstream 8075 true Bd1: 72897704-72905778 Brachypodium distachyon
Bradi1g75920 5.0kb downstream 5.0kb downstream 5000 false Bd1: 72897704-72902703 Brachypodium distachyon
Bradi1g75920 10.0kb upstream 10.0kb upstream 13075 true Bd1: 72902704-72915778 Brachypodium distachyon
Bradi1g75920 10.0kb upstream 10.0kb upstream 10000 false Bd1: 72905779-72915778 Brachypodium distachyon
Bradi1g75920 10.0kb downstream 10.0kb downstream 13075 true Bd1: 72892704-72905778 Brachypodium distachyon
Bradi1g75920 10.0kb downstream 10.0kb downstream 10000 false Bd1: 72892704-72902703 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568387 5269 Grass View MSA
122043002 5273 Angiosperm View MSA
121310062 5274 Embryophyte View MSA
123347658 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.07       Low
cufflinks 5.989        
cufflinks 7.17        
cufflinks 4.597        
cufflinks 2.217       Low
cufflinks 6.299        
cufflinks 5.853        
cufflinks 4.78        
cufflinks 5.526        
cufflinks 6.242        
cufflinks 5.975        
cufflinks 6.059        
cufflinks 5.283        
cufflinks 5.158        
cufflinks 3.025       Low
cufflinks 5.285        
cufflinks 3.408       Low
cufflinks 7.135        
cufflinks 5.106        
cufflinks 5.42        
cufflinks 7.355        
cufflinks 7.535       High
cufflinks 4.745        
cufflinks 5.954        
cufflinks 5.353        
cufflinks 6.575        
cufflinks 10.014     High High
cufflinks 6.539        
cufflinks 7.297        
cufflinks 7.157        

0 Strain