Gene : Bradi1g75960 B. distachyon v3.1
Defline:  (1 of 2) K01681 - aconitate hydratase (ACO, acnA) Genomic Order:  9536
Name:  ? Bradi1g75960 Secondary Identifier:  ? PAC:32792823
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon GLYOXYLATE-BYPASS Brachypodium distachyon pathologic  
Bdistachyon PWY-5464 Brachypodium distachyon pathologic  
Bdistachyon PWY-561 Brachypodium distachyon pathologic  
Bdistachyon PWY-5690 Brachypodium distachyon pathologic  
Bdistachyon PWY-5913 Brachypodium distachyon pathologic  
Bdistachyon PWY-6549 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g75960 0.5kb upstream 0.5kb upstream 7433 true Bd1: 72947285-72954717 Brachypodium distachyon
Bradi1g75960 0.5kb upstream 0.5kb upstream 500 false Bd1: 72947285-72947784 Brachypodium distachyon
Bradi1g75960 0.5kb downstream 0.5kb downstream 7433 true Bd1: 72947785-72955217 Brachypodium distachyon
Bradi1g75960 0.5kb downstream 0.5kb downstream 500 false Bd1: 72954718-72955217 Brachypodium distachyon
Bradi1g75960 1.0kb upstream 1.0kb upstream 7933 true Bd1: 72946785-72954717 Brachypodium distachyon
Bradi1g75960 1.0kb upstream 1.0kb upstream 1000 false Bd1: 72946785-72947784 Brachypodium distachyon
Bradi1g75960 1.0kb downstream 1.0kb downstream 7933 true Bd1: 72947785-72955717 Brachypodium distachyon
Bradi1g75960 1.0kb downstream 1.0kb downstream 1000 false Bd1: 72954718-72955717 Brachypodium distachyon
Bradi1g75960 2.0kb upstream 2.0kb upstream 8933 true Bd1: 72945785-72954717 Brachypodium distachyon
Bradi1g75960 2.0kb upstream 2.0kb upstream 2000 false Bd1: 72945785-72947784 Brachypodium distachyon
Bradi1g75960 2.0kb downstream 2.0kb downstream 8933 true Bd1: 72947785-72956717 Brachypodium distachyon
Bradi1g75960 2.0kb downstream 2.0kb downstream 2000 false Bd1: 72954718-72956717 Brachypodium distachyon
Bradi1g75960 5.0kb upstream 5.0kb upstream 11933 true Bd1: 72942785-72954717 Brachypodium distachyon
Bradi1g75960 5.0kb upstream 5.0kb upstream 5000 false Bd1: 72942785-72947784 Brachypodium distachyon
Bradi1g75960 5.0kb downstream 5.0kb downstream 11933 true Bd1: 72947785-72959717 Brachypodium distachyon
Bradi1g75960 5.0kb downstream 5.0kb downstream 5000 false Bd1: 72954718-72959717 Brachypodium distachyon
Bradi1g75960 10.0kb upstream 10.0kb upstream 16933 true Bd1: 72937785-72954717 Brachypodium distachyon
Bradi1g75960 10.0kb upstream 10.0kb upstream 10000 false Bd1: 72937785-72947784 Brachypodium distachyon
Bradi1g75960 10.0kb downstream 10.0kb downstream 16933 true Bd1: 72947785-72964717 Brachypodium distachyon
Bradi1g75960 10.0kb downstream 10.0kb downstream 10000 false Bd1: 72954718-72964717 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122025860 5273 Angiosperm View MSA
124588210 5269 Grass View MSA
121295930 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.883     High  
cufflinks 35.656     High  
cufflinks 30.484     High  
cufflinks 24.819     High  
cufflinks 13.208     High Low
cufflinks 29.746     High  
cufflinks 30.918     High  
cufflinks 17.78     High  
cufflinks 23.176     High  
cufflinks 12.766     High Low
cufflinks 25.943     High  
cufflinks 33.401     High  
cufflinks 20.979     High  
cufflinks 18.414     High  
cufflinks 19.251     High  
cufflinks 36.779     High  
cufflinks 14.717     High Low
cufflinks 98.529     High High
cufflinks 40.945     High  
cufflinks 30.836     High  
cufflinks 22.158     High  
cufflinks 24.911     High  
cufflinks 17.528     High  
cufflinks 19.48     High  
cufflinks 21.119     High  
cufflinks 24.563     High  
cufflinks 18.868     High  
cufflinks 21.549     High  
cufflinks 21.338     High  
cufflinks 29.579     High  

0 Strain