Gene : Bradi1g75930 B. distachyon v3.1
Defline:  (1 of 5) PF11833 - Protein of unknown function (DUF3353) (DUF3353) Genomic Order:  9533
Name:  ? Bradi1g75930 Secondary Identifier:  ? PAC:32803792
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g75930 0.5kb upstream 0.5kb upstream 3997 true Bd1: 72907486-72911482 Brachypodium distachyon
Bradi1g75930 0.5kb upstream 0.5kb upstream 500 false Bd1: 72907486-72907985 Brachypodium distachyon
Bradi1g75930 0.5kb downstream 0.5kb downstream 3997 true Bd1: 72907986-72911982 Brachypodium distachyon
Bradi1g75930 0.5kb downstream 0.5kb downstream 500 false Bd1: 72911483-72911982 Brachypodium distachyon
Bradi1g75930 1.0kb upstream 1.0kb upstream 4497 true Bd1: 72906986-72911482 Brachypodium distachyon
Bradi1g75930 1.0kb upstream 1.0kb upstream 1000 false Bd1: 72906986-72907985 Brachypodium distachyon
Bradi1g75930 1.0kb downstream 1.0kb downstream 4497 true Bd1: 72907986-72912482 Brachypodium distachyon
Bradi1g75930 1.0kb downstream 1.0kb downstream 1000 false Bd1: 72911483-72912482 Brachypodium distachyon
Bradi1g75930 2.0kb upstream 2.0kb upstream 5497 true Bd1: 72905986-72911482 Brachypodium distachyon
Bradi1g75930 2.0kb upstream 2.0kb upstream 2000 false Bd1: 72905986-72907985 Brachypodium distachyon
Bradi1g75930 2.0kb downstream 2.0kb downstream 5497 true Bd1: 72907986-72913482 Brachypodium distachyon
Bradi1g75930 2.0kb downstream 2.0kb downstream 2000 false Bd1: 72911483-72913482 Brachypodium distachyon
Bradi1g75930 5.0kb upstream 5.0kb upstream 8497 true Bd1: 72902986-72911482 Brachypodium distachyon
Bradi1g75930 5.0kb upstream 5.0kb upstream 5000 false Bd1: 72902986-72907985 Brachypodium distachyon
Bradi1g75930 5.0kb downstream 5.0kb downstream 8497 true Bd1: 72907986-72916482 Brachypodium distachyon
Bradi1g75930 5.0kb downstream 5.0kb downstream 5000 false Bd1: 72911483-72916482 Brachypodium distachyon
Bradi1g75930 10.0kb upstream 10.0kb upstream 13497 true Bd1: 72897986-72911482 Brachypodium distachyon
Bradi1g75930 10.0kb upstream 10.0kb upstream 10000 false Bd1: 72897986-72907985 Brachypodium distachyon
Bradi1g75930 10.0kb downstream 10.0kb downstream 13497 true Bd1: 72907986-72921482 Brachypodium distachyon
Bradi1g75930 10.0kb downstream 10.0kb downstream 10000 false Bd1: 72911483-72921482 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573022 5269 Grass View MSA
122047398 5273 Angiosperm View MSA
121344434 5274 Embryophyte View MSA
123428691 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.537     High  
cufflinks 28.228     High  
cufflinks 14.009     High  
cufflinks 23.112     High  
cufflinks 15.482     High  
cufflinks 30.619     High  
cufflinks 34.37     High High
cufflinks 13.883     High  
cufflinks 22.219     High  
cufflinks 13.98     High  
cufflinks 34.797     High High
cufflinks 18.011     High  
cufflinks 31.031     High  
cufflinks 35.975     High High
cufflinks 13.173     High  
cufflinks 24.582     High  
cufflinks 21.515     High  
cufflinks 4.257       Low
cufflinks 31.454     High  
cufflinks 19.052     High  
cufflinks 23.296     High  
cufflinks 9.705       Low
cufflinks 13.158     High  
cufflinks 23.917     High  
cufflinks 33.773     High High
cufflinks 17.362     High  
cufflinks 46.594     High High
cufflinks 15.564     High  
cufflinks 12.641     High  
cufflinks 13.434     High  

0 Strain