Gene : Bradi1g76140 B. distachyon v3.1
Defline:  (1 of 1) PTHR23416//PTHR23416:SF63 - SIALIC ACID SYNTHASE-RELATED // SERINE ACETYLTRANSFERASE 2-RELATED Genomic Order:  9559
Name:  ? Bradi1g76140 Secondary Identifier:  ? PAC:32802498
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon CYSTSYN-PWY Brachypodium distachyon pathologic  
Bdistachyon PWY-6936 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g76140 0.5kb upstream 0.5kb upstream 9017 true Bd1: 73059234-73068250 Brachypodium distachyon
Bradi1g76140 0.5kb upstream 0.5kb upstream 500 false Bd1: 73059234-73059733 Brachypodium distachyon
Bradi1g76140 0.5kb downstream 0.5kb downstream 9017 true Bd1: 73059734-73068750 Brachypodium distachyon
Bradi1g76140 0.5kb downstream 0.5kb downstream 500 false Bd1: 73068251-73068750 Brachypodium distachyon
Bradi1g76140 1.0kb upstream 1.0kb upstream 9517 true Bd1: 73058734-73068250 Brachypodium distachyon
Bradi1g76140 1.0kb upstream 1.0kb upstream 1000 false Bd1: 73058734-73059733 Brachypodium distachyon
Bradi1g76140 1.0kb downstream 1.0kb downstream 9517 true Bd1: 73059734-73069250 Brachypodium distachyon
Bradi1g76140 1.0kb downstream 1.0kb downstream 1000 false Bd1: 73068251-73069250 Brachypodium distachyon
Bradi1g76140 2.0kb upstream 2.0kb upstream 10517 true Bd1: 73057734-73068250 Brachypodium distachyon
Bradi1g76140 2.0kb upstream 2.0kb upstream 2000 false Bd1: 73057734-73059733 Brachypodium distachyon
Bradi1g76140 2.0kb downstream 2.0kb downstream 10517 true Bd1: 73059734-73070250 Brachypodium distachyon
Bradi1g76140 2.0kb downstream 2.0kb downstream 2000 false Bd1: 73068251-73070250 Brachypodium distachyon
Bradi1g76140 5.0kb upstream 5.0kb upstream 13517 true Bd1: 73054734-73068250 Brachypodium distachyon
Bradi1g76140 5.0kb upstream 5.0kb upstream 5000 false Bd1: 73054734-73059733 Brachypodium distachyon
Bradi1g76140 5.0kb downstream 5.0kb downstream 13517 true Bd1: 73059734-73073250 Brachypodium distachyon
Bradi1g76140 5.0kb downstream 5.0kb downstream 5000 false Bd1: 73068251-73073250 Brachypodium distachyon
Bradi1g76140 10.0kb upstream 10.0kb upstream 18517 true Bd1: 73049734-73068250 Brachypodium distachyon
Bradi1g76140 10.0kb upstream 10.0kb upstream 10000 false Bd1: 73049734-73059733 Brachypodium distachyon
Bradi1g76140 10.0kb downstream 10.0kb downstream 18517 true Bd1: 73059734-73078250 Brachypodium distachyon
Bradi1g76140 10.0kb downstream 10.0kb downstream 10000 false Bd1: 73068251-73078250 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124589856 5269 Grass View MSA
122045908 5273 Angiosperm View MSA
121349787 5274 Embryophyte View MSA
123426625 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.673       High
cufflinks 1.919       Low
cufflinks 1.902       Low
cufflinks 2.176       Low
cufflinks 3.181        
cufflinks 3.969        
cufflinks 2.624        
cufflinks 5.91        
cufflinks 5.7        
cufflinks 7.772       High
cufflinks 4.674        
cufflinks 4.545        
cufflinks 6.106       High
cufflinks 6.411       High
cufflinks 8.547     High High
cufflinks 3.821        
cufflinks 5.845        
cufflinks 3.13        
cufflinks 2.036       Low
cufflinks 1.852       Low
cufflinks 2.771        
cufflinks 6.331       High
cufflinks 5.749        
cufflinks 6.26       High
cufflinks 4.811        
cufflinks 2.284        
cufflinks 6.149       High
cufflinks 3.087        
cufflinks 4.046        
cufflinks 1.745       Low

0 Strain