Gene : Bradi5g08360 B. distachyon v3.1
Defline:  (1 of 1) PTHR21240 - 2-AMINO-3-CARBOXYLMUCONATE-6-SEMIALDEHYDE DECARBOXYLASE Genomic Order:  796
Name:  ? Bradi5g08360 Secondary Identifier:  ? PAC:32808858
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g08360 0.5kb upstream 0.5kb upstream 6759 true Bd5: 11136542-11143300 Brachypodium distachyon
Bradi5g08360 0.5kb upstream 0.5kb upstream 500 false Bd5: 11136542-11137041 Brachypodium distachyon
Bradi5g08360 0.5kb downstream 0.5kb downstream 6759 true Bd5: 11137042-11143800 Brachypodium distachyon
Bradi5g08360 0.5kb downstream 0.5kb downstream 500 false Bd5: 11143301-11143800 Brachypodium distachyon
Bradi5g08360 1.0kb upstream 1.0kb upstream 7259 true Bd5: 11136042-11143300 Brachypodium distachyon
Bradi5g08360 1.0kb upstream 1.0kb upstream 1000 false Bd5: 11136042-11137041 Brachypodium distachyon
Bradi5g08360 1.0kb downstream 1.0kb downstream 7259 true Bd5: 11137042-11144300 Brachypodium distachyon
Bradi5g08360 1.0kb downstream 1.0kb downstream 1000 false Bd5: 11143301-11144300 Brachypodium distachyon
Bradi5g08360 2.0kb upstream 2.0kb upstream 8259 true Bd5: 11135042-11143300 Brachypodium distachyon
Bradi5g08360 2.0kb upstream 2.0kb upstream 2000 false Bd5: 11135042-11137041 Brachypodium distachyon
Bradi5g08360 2.0kb downstream 2.0kb downstream 8259 true Bd5: 11137042-11145300 Brachypodium distachyon
Bradi5g08360 2.0kb downstream 2.0kb downstream 2000 false Bd5: 11143301-11145300 Brachypodium distachyon
Bradi5g08360 5.0kb upstream 5.0kb upstream 11259 true Bd5: 11132042-11143300 Brachypodium distachyon
Bradi5g08360 5.0kb upstream 5.0kb upstream 5000 false Bd5: 11132042-11137041 Brachypodium distachyon
Bradi5g08360 5.0kb downstream 5.0kb downstream 11259 true Bd5: 11137042-11148300 Brachypodium distachyon
Bradi5g08360 5.0kb downstream 5.0kb downstream 5000 false Bd5: 11143301-11148300 Brachypodium distachyon
Bradi5g08360 10.0kb upstream 10.0kb upstream 16259 true Bd5: 11127042-11143300 Brachypodium distachyon
Bradi5g08360 10.0kb upstream 10.0kb upstream 10000 false Bd5: 11127042-11137041 Brachypodium distachyon
Bradi5g08360 10.0kb downstream 10.0kb downstream 16259 true Bd5: 11137042-11153300 Brachypodium distachyon
Bradi5g08360 10.0kb downstream 10.0kb downstream 10000 false Bd5: 11143301-11153300 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041304 5273 Angiosperm View MSA
124580772 5269 Grass View MSA
121344175 5274 Embryophyte View MSA
123425366 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.278        
cufflinks 9.978       High
cufflinks 10.817     High High
cufflinks 11.513     High High
cufflinks 5.806        
cufflinks 7.981        
cufflinks 8.554        
cufflinks 7.587        
cufflinks 7.17        
cufflinks 6.905        
cufflinks 6.273        
cufflinks 7.498        
cufflinks 5.957        
cufflinks 5.725        
cufflinks 6.974        
cufflinks 8.877        
cufflinks 6.837        
cufflinks 3.934       Low
cufflinks 5.413        
cufflinks 2.104       Low
cufflinks 6.118        
cufflinks 8.092        
cufflinks 7.093        
cufflinks 7.352        
cufflinks 8.183        
cufflinks 10.28       High
cufflinks 5.518        
cufflinks 9.084        
cufflinks 9.377        
cufflinks 7.766        

0 Strain