Gene : Bradi1g76280 B. distachyon v3.1
Defline:  (1 of 1) K10526 - OPC-8:0 CoA ligase 1 (OPCL1) Genomic Order:  9574
Name:  ? Bradi1g76280 Secondary Identifier:  ? PAC:32798414
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g76280 0.5kb upstream 0.5kb upstream 7279 true Bd1: 73146378-73153656 Brachypodium distachyon
Bradi1g76280 0.5kb upstream 0.5kb upstream 500 false Bd1: 73153157-73153656 Brachypodium distachyon
Bradi1g76280 0.5kb downstream 0.5kb downstream 7279 true Bd1: 73145878-73153156 Brachypodium distachyon
Bradi1g76280 0.5kb downstream 0.5kb downstream 500 false Bd1: 73145878-73146377 Brachypodium distachyon
Bradi1g76280 1.0kb upstream 1.0kb upstream 7779 true Bd1: 73146378-73154156 Brachypodium distachyon
Bradi1g76280 1.0kb upstream 1.0kb upstream 1000 false Bd1: 73153157-73154156 Brachypodium distachyon
Bradi1g76280 1.0kb downstream 1.0kb downstream 7779 true Bd1: 73145378-73153156 Brachypodium distachyon
Bradi1g76280 1.0kb downstream 1.0kb downstream 1000 false Bd1: 73145378-73146377 Brachypodium distachyon
Bradi1g76280 2.0kb upstream 2.0kb upstream 8779 true Bd1: 73146378-73155156 Brachypodium distachyon
Bradi1g76280 2.0kb upstream 2.0kb upstream 2000 false Bd1: 73153157-73155156 Brachypodium distachyon
Bradi1g76280 2.0kb downstream 2.0kb downstream 8779 true Bd1: 73144378-73153156 Brachypodium distachyon
Bradi1g76280 2.0kb downstream 2.0kb downstream 2000 false Bd1: 73144378-73146377 Brachypodium distachyon
Bradi1g76280 5.0kb upstream 5.0kb upstream 11779 true Bd1: 73146378-73158156 Brachypodium distachyon
Bradi1g76280 5.0kb upstream 5.0kb upstream 5000 false Bd1: 73153157-73158156 Brachypodium distachyon
Bradi1g76280 5.0kb downstream 5.0kb downstream 11779 true Bd1: 73141378-73153156 Brachypodium distachyon
Bradi1g76280 5.0kb downstream 5.0kb downstream 5000 false Bd1: 73141378-73146377 Brachypodium distachyon
Bradi1g76280 10.0kb upstream 10.0kb upstream 16779 true Bd1: 73146378-73163156 Brachypodium distachyon
Bradi1g76280 10.0kb upstream 10.0kb upstream 10000 false Bd1: 73153157-73163156 Brachypodium distachyon
Bradi1g76280 10.0kb downstream 10.0kb downstream 16779 true Bd1: 73136378-73153156 Brachypodium distachyon
Bradi1g76280 10.0kb downstream 10.0kb downstream 10000 false Bd1: 73136378-73146377 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576093 5269 Grass View MSA
122043430 5273 Angiosperm View MSA
121350022 5274 Embryophyte View MSA
123427881 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.378        
cufflinks 1.038        
cufflinks 1.597        
cufflinks 1.125        
cufflinks 8.83       High
cufflinks 1.014        
cufflinks 1.195        
cufflinks 1.789        
cufflinks 0.922       Low
cufflinks 1.345        
cufflinks 1.909        
cufflinks 1.588        
cufflinks 1.207        
cufflinks 0.962       Low
cufflinks 1.681        
cufflinks 1.162        
cufflinks 1.924        
cufflinks 4.259       High
cufflinks 6.903       High
cufflinks 13.985     High High
cufflinks 2.575        
cufflinks 1.64        
cufflinks 1.662        
cufflinks 1.122        
cufflinks 0.944       Low
cufflinks 1.751        
cufflinks 1.435        
cufflinks 1.805        
cufflinks 1.775        
cufflinks 2.453        

0 Strain