Gene : Bradi1g76800 B. distachyon v3.1
Defline:  (1 of 1) K00766 - anthranilate phosphoribosyltransferase (trpD) Genomic Order:  9639
Name:  ? Bradi1g76800 Secondary Identifier:  ? PAC:32794568
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon TRPSYN-PWY Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g76800 0.5kb upstream 0.5kb upstream 4003 true Bd1: 73501443-73505445 Brachypodium distachyon
Bradi1g76800 0.5kb upstream 0.5kb upstream 500 false Bd1: 73501443-73501942 Brachypodium distachyon
Bradi1g76800 0.5kb downstream 0.5kb downstream 4003 true Bd1: 73501943-73505945 Brachypodium distachyon
Bradi1g76800 0.5kb downstream 0.5kb downstream 500 false Bd1: 73505446-73505945 Brachypodium distachyon
Bradi1g76800 1.0kb upstream 1.0kb upstream 4503 true Bd1: 73500943-73505445 Brachypodium distachyon
Bradi1g76800 1.0kb upstream 1.0kb upstream 1000 false Bd1: 73500943-73501942 Brachypodium distachyon
Bradi1g76800 1.0kb downstream 1.0kb downstream 4503 true Bd1: 73501943-73506445 Brachypodium distachyon
Bradi1g76800 1.0kb downstream 1.0kb downstream 1000 false Bd1: 73505446-73506445 Brachypodium distachyon
Bradi1g76800 2.0kb upstream 2.0kb upstream 5503 true Bd1: 73499943-73505445 Brachypodium distachyon
Bradi1g76800 2.0kb upstream 2.0kb upstream 2000 false Bd1: 73499943-73501942 Brachypodium distachyon
Bradi1g76800 2.0kb downstream 2.0kb downstream 5503 true Bd1: 73501943-73507445 Brachypodium distachyon
Bradi1g76800 2.0kb downstream 2.0kb downstream 2000 false Bd1: 73505446-73507445 Brachypodium distachyon
Bradi1g76800 5.0kb upstream 5.0kb upstream 8503 true Bd1: 73496943-73505445 Brachypodium distachyon
Bradi1g76800 5.0kb upstream 5.0kb upstream 5000 false Bd1: 73496943-73501942 Brachypodium distachyon
Bradi1g76800 5.0kb downstream 5.0kb downstream 8503 true Bd1: 73501943-73510445 Brachypodium distachyon
Bradi1g76800 5.0kb downstream 5.0kb downstream 5000 false Bd1: 73505446-73510445 Brachypodium distachyon
Bradi1g76800 10.0kb upstream 10.0kb upstream 13503 true Bd1: 73491943-73505445 Brachypodium distachyon
Bradi1g76800 10.0kb upstream 10.0kb upstream 10000 false Bd1: 73491943-73501942 Brachypodium distachyon
Bradi1g76800 10.0kb downstream 10.0kb downstream 13503 true Bd1: 73501943-73515445 Brachypodium distachyon
Bradi1g76800 10.0kb downstream 10.0kb downstream 10000 false Bd1: 73505446-73515445 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578755 5269 Grass View MSA
122046938 5273 Angiosperm View MSA
121344269 5274 Embryophyte View MSA
123424710 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.36     High  
cufflinks 14.288     High  
cufflinks 8.685        
cufflinks 10.709     High  
cufflinks 21.785     High High
cufflinks 13.509     High  
cufflinks 15.485     High  
cufflinks 8.85        
cufflinks 11.267     High  
cufflinks 5.341       Low
cufflinks 16.362     High  
cufflinks 14.752     High  
cufflinks 10.856     High  
cufflinks 12.282     High  
cufflinks 13.159     High  
cufflinks 13.781     High  
cufflinks 8.08        
cufflinks 15.044     High  
cufflinks 26.643     High High
cufflinks 18.992     High High
cufflinks 6.818       Low
cufflinks 6.876       Low
cufflinks 7.647        
cufflinks 10.606     High  
cufflinks 11.453     High  
cufflinks 8.854        
cufflinks 14.61     High  
cufflinks 8.474        
cufflinks 6.55       Low
cufflinks 11.389     High  

0 Strain