Gene : Bradi1g76880 B. distachyon v3.1
Defline:  (1 of 1) PTHR11994:SF4 - 54S RIBOSOMAL PROTEIN L7, MITOCHONDRIAL Genomic Order:  9648
Name:  ? Bradi1g76880 Secondary Identifier:  ? PAC:32801068
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g76880 0.5kb upstream 0.5kb upstream 2424 true Bd1: 73552181-73554604 Brachypodium distachyon
Bradi1g76880 0.5kb upstream 0.5kb upstream 500 false Bd1: 73552181-73552680 Brachypodium distachyon
Bradi1g76880 0.5kb downstream 0.5kb downstream 2424 true Bd1: 73552681-73555104 Brachypodium distachyon
Bradi1g76880 0.5kb downstream 0.5kb downstream 500 false Bd1: 73554605-73555104 Brachypodium distachyon
Bradi1g76880 1.0kb upstream 1.0kb upstream 2924 true Bd1: 73551681-73554604 Brachypodium distachyon
Bradi1g76880 1.0kb upstream 1.0kb upstream 1000 false Bd1: 73551681-73552680 Brachypodium distachyon
Bradi1g76880 1.0kb downstream 1.0kb downstream 2924 true Bd1: 73552681-73555604 Brachypodium distachyon
Bradi1g76880 1.0kb downstream 1.0kb downstream 1000 false Bd1: 73554605-73555604 Brachypodium distachyon
Bradi1g76880 2.0kb upstream 2.0kb upstream 3924 true Bd1: 73550681-73554604 Brachypodium distachyon
Bradi1g76880 2.0kb upstream 2.0kb upstream 2000 false Bd1: 73550681-73552680 Brachypodium distachyon
Bradi1g76880 2.0kb downstream 2.0kb downstream 3924 true Bd1: 73552681-73556604 Brachypodium distachyon
Bradi1g76880 2.0kb downstream 2.0kb downstream 2000 false Bd1: 73554605-73556604 Brachypodium distachyon
Bradi1g76880 5.0kb upstream 5.0kb upstream 6924 true Bd1: 73547681-73554604 Brachypodium distachyon
Bradi1g76880 5.0kb upstream 5.0kb upstream 5000 false Bd1: 73547681-73552680 Brachypodium distachyon
Bradi1g76880 5.0kb downstream 5.0kb downstream 6924 true Bd1: 73552681-73559604 Brachypodium distachyon
Bradi1g76880 5.0kb downstream 5.0kb downstream 5000 false Bd1: 73554605-73559604 Brachypodium distachyon
Bradi1g76880 10.0kb upstream 10.0kb upstream 11924 true Bd1: 73542681-73554604 Brachypodium distachyon
Bradi1g76880 10.0kb upstream 10.0kb upstream 10000 false Bd1: 73542681-73552680 Brachypodium distachyon
Bradi1g76880 10.0kb downstream 10.0kb downstream 11924 true Bd1: 73552681-73564604 Brachypodium distachyon
Bradi1g76880 10.0kb downstream 10.0kb downstream 10000 false Bd1: 73554605-73564604 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576773 5269 Grass View MSA
122047733 5273 Angiosperm View MSA
121345632 5274 Embryophyte View MSA
123380248 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 126.325     High  
cufflinks 167.042     High  
cufflinks 152.428     High  
cufflinks 152.498     High  
cufflinks 115.52     High  
cufflinks 138.913     High  
cufflinks 163.439     High  
cufflinks 127.137     High  
cufflinks 115.174     High  
cufflinks 154.205     High  
cufflinks 99.417     High  
cufflinks 127.633     High  
cufflinks 103.021     High  
cufflinks 94.478     High  
cufflinks 97.006     High  
cufflinks 159.135     High  
cufflinks 153.016     High  
cufflinks 11.581     High Low
cufflinks 123.785     High  
cufflinks 16.197     High Low
cufflinks 85.079     High  
cufflinks 146.068     High  
cufflinks 117.847     High  
cufflinks 120.43     High  
cufflinks 133.392     High  
cufflinks 155.857     High  
cufflinks 62.797     High  
cufflinks 145.619     High  
cufflinks 154.591     High  
cufflinks 132.022     High  

0 Strain