Gene : Bradi2g02930 B. distachyon v3.1
Defline:  (1 of 4) PF00805 - Pentapeptide repeats (8 copies) (Pentapeptide) Genomic Order:  374
Name:  ? Bradi2g02930 Secondary Identifier:  ? PAC:32772126
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g02930 0.5kb upstream 0.5kb upstream 2719 true Bd2: 2139855-2142573 Brachypodium distachyon
Bradi2g02930 0.5kb upstream 0.5kb upstream 500 false Bd2: 2142074-2142573 Brachypodium distachyon
Bradi2g02930 0.5kb downstream 0.5kb downstream 2719 true Bd2: 2139355-2142073 Brachypodium distachyon
Bradi2g02930 0.5kb downstream 0.5kb downstream 500 false Bd2: 2139355-2139854 Brachypodium distachyon
Bradi2g02930 1.0kb upstream 1.0kb upstream 3219 true Bd2: 2139855-2143073 Brachypodium distachyon
Bradi2g02930 1.0kb upstream 1.0kb upstream 1000 false Bd2: 2142074-2143073 Brachypodium distachyon
Bradi2g02930 1.0kb downstream 1.0kb downstream 3219 true Bd2: 2138855-2142073 Brachypodium distachyon
Bradi2g02930 1.0kb downstream 1.0kb downstream 1000 false Bd2: 2138855-2139854 Brachypodium distachyon
Bradi2g02930 2.0kb upstream 2.0kb upstream 4219 true Bd2: 2139855-2144073 Brachypodium distachyon
Bradi2g02930 2.0kb upstream 2.0kb upstream 2000 false Bd2: 2142074-2144073 Brachypodium distachyon
Bradi2g02930 2.0kb downstream 2.0kb downstream 4219 true Bd2: 2137855-2142073 Brachypodium distachyon
Bradi2g02930 2.0kb downstream 2.0kb downstream 2000 false Bd2: 2137855-2139854 Brachypodium distachyon
Bradi2g02930 5.0kb upstream 5.0kb upstream 7219 true Bd2: 2139855-2147073 Brachypodium distachyon
Bradi2g02930 5.0kb upstream 5.0kb upstream 5000 false Bd2: 2142074-2147073 Brachypodium distachyon
Bradi2g02930 5.0kb downstream 5.0kb downstream 7219 true Bd2: 2134855-2142073 Brachypodium distachyon
Bradi2g02930 5.0kb downstream 5.0kb downstream 5000 false Bd2: 2134855-2139854 Brachypodium distachyon
Bradi2g02930 10.0kb upstream 10.0kb upstream 12219 true Bd2: 2139855-2152073 Brachypodium distachyon
Bradi2g02930 10.0kb upstream 10.0kb upstream 10000 false Bd2: 2142074-2152073 Brachypodium distachyon
Bradi2g02930 10.0kb downstream 10.0kb downstream 12219 true Bd2: 2129855-2142073 Brachypodium distachyon
Bradi2g02930 10.0kb downstream 10.0kb downstream 10000 false Bd2: 2129855-2139854 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577951 5269 Grass View MSA
122045781 5273 Angiosperm View MSA
121346461 5274 Embryophyte View MSA
123426937 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.12     High  
cufflinks 49.414     High  
cufflinks 44.6     High  
cufflinks 57.467     High  
cufflinks 42.178     High  
cufflinks 50.096     High  
cufflinks 51.194     High  
cufflinks 44.382     High  
cufflinks 45.622     High  
cufflinks 79.559     High High
cufflinks 40.178     High  
cufflinks 42.811     High  
cufflinks 56.268     High  
cufflinks 58.251     High  
cufflinks 40.073     High  
cufflinks 53.021     High  
cufflinks 60.111     High  
cufflinks 4.065       Low
cufflinks 23.979     High  
cufflinks 20.762     High  
cufflinks 28.629     High  
cufflinks 48.96     High  
cufflinks 44.187     High  
cufflinks 51.541     High  
cufflinks 60.817     High  
cufflinks 56.103     High  
cufflinks 34.634     High  
cufflinks 55.699     High  
cufflinks 55.037     High  
cufflinks 28.882     High  

0 Strain