Gene : Bradi5g05150 B. distachyon v3.1
Defline:  (1 of 2) K03946 - NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 2 (NDUFA2) Genomic Order:  564
Name:  ? Bradi5g05150 Secondary Identifier:  ? PAC:32808840
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g05150 0.5kb upstream 0.5kb upstream 2906 true Bd5: 6662618-6665523 Brachypodium distachyon
Bradi5g05150 0.5kb upstream 0.5kb upstream 500 false Bd5: 6662618-6663117 Brachypodium distachyon
Bradi5g05150 0.5kb downstream 0.5kb downstream 2906 true Bd5: 6663118-6666023 Brachypodium distachyon
Bradi5g05150 0.5kb downstream 0.5kb downstream 500 false Bd5: 6665524-6666023 Brachypodium distachyon
Bradi5g05150 1.0kb upstream 1.0kb upstream 3406 true Bd5: 6662118-6665523 Brachypodium distachyon
Bradi5g05150 1.0kb upstream 1.0kb upstream 1000 false Bd5: 6662118-6663117 Brachypodium distachyon
Bradi5g05150 1.0kb downstream 1.0kb downstream 3406 true Bd5: 6663118-6666523 Brachypodium distachyon
Bradi5g05150 1.0kb downstream 1.0kb downstream 1000 false Bd5: 6665524-6666523 Brachypodium distachyon
Bradi5g05150 2.0kb upstream 2.0kb upstream 4406 true Bd5: 6661118-6665523 Brachypodium distachyon
Bradi5g05150 2.0kb upstream 2.0kb upstream 2000 false Bd5: 6661118-6663117 Brachypodium distachyon
Bradi5g05150 2.0kb downstream 2.0kb downstream 4406 true Bd5: 6663118-6667523 Brachypodium distachyon
Bradi5g05150 2.0kb downstream 2.0kb downstream 2000 false Bd5: 6665524-6667523 Brachypodium distachyon
Bradi5g05150 5.0kb upstream 5.0kb upstream 7406 true Bd5: 6658118-6665523 Brachypodium distachyon
Bradi5g05150 5.0kb upstream 5.0kb upstream 5000 false Bd5: 6658118-6663117 Brachypodium distachyon
Bradi5g05150 5.0kb downstream 5.0kb downstream 7406 true Bd5: 6663118-6670523 Brachypodium distachyon
Bradi5g05150 5.0kb downstream 5.0kb downstream 5000 false Bd5: 6665524-6670523 Brachypodium distachyon
Bradi5g05150 10.0kb upstream 10.0kb upstream 12406 true Bd5: 6653118-6665523 Brachypodium distachyon
Bradi5g05150 10.0kb upstream 10.0kb upstream 10000 false Bd5: 6653118-6663117 Brachypodium distachyon
Bradi5g05150 10.0kb downstream 10.0kb downstream 12406 true Bd5: 6663118-6675523 Brachypodium distachyon
Bradi5g05150 10.0kb downstream 10.0kb downstream 10000 false Bd5: 6665524-6675523 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124586524 5269 Grass View MSA
122045134 5273 Angiosperm View MSA
121343920 5274 Embryophyte View MSA
123424630 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.581     High  
cufflinks 13.937     High  
cufflinks 13.366     High  
cufflinks 23.334     High  
cufflinks 24.329     High  
cufflinks 11.986     High  
cufflinks 13.412     High  
cufflinks 10.11     High  
cufflinks 11.535     High  
cufflinks 21.505     High  
cufflinks 3.925       Low
cufflinks 12.575     High  
cufflinks 3.861       Low
cufflinks 5.23       Low
cufflinks 16.289     High  
cufflinks 11.006     High  
cufflinks 25.923     High  
cufflinks 21.684     High  
cufflinks 16.165     High  
cufflinks 23.108     High  
cufflinks 37.343     High High
cufflinks 9.806        
cufflinks 10.861     High  
cufflinks 10.937     High  
cufflinks 17.328     High  
cufflinks 18.356     High  
cufflinks 6.395       Low
cufflinks 18.903     High  
cufflinks 16.78     High  
cufflinks 25.238     High  

0 Strain