Gene : Bradi2g03760 B. distachyon v3.1
Defline:  (1 of 2) PTHR11205:SF24 - 40S RIBOSOMAL PROTEIN S5-1-RELATED Genomic Order:  482
Name:  ? Bradi2g03760 Secondary Identifier:  ? PAC:32776400
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g03760 0.5kb upstream 0.5kb upstream 2417 true Bd2: 2684994-2687410 Brachypodium distachyon
Bradi2g03760 0.5kb upstream 0.5kb upstream 500 false Bd2: 2686911-2687410 Brachypodium distachyon
Bradi2g03760 0.5kb downstream 0.5kb downstream 2417 true Bd2: 2684494-2686910 Brachypodium distachyon
Bradi2g03760 0.5kb downstream 0.5kb downstream 500 false Bd2: 2684494-2684993 Brachypodium distachyon
Bradi2g03760 1.0kb upstream 1.0kb upstream 2917 true Bd2: 2684994-2687910 Brachypodium distachyon
Bradi2g03760 1.0kb upstream 1.0kb upstream 1000 false Bd2: 2686911-2687910 Brachypodium distachyon
Bradi2g03760 1.0kb downstream 1.0kb downstream 2917 true Bd2: 2683994-2686910 Brachypodium distachyon
Bradi2g03760 1.0kb downstream 1.0kb downstream 1000 false Bd2: 2683994-2684993 Brachypodium distachyon
Bradi2g03760 2.0kb upstream 2.0kb upstream 3917 true Bd2: 2684994-2688910 Brachypodium distachyon
Bradi2g03760 2.0kb upstream 2.0kb upstream 2000 false Bd2: 2686911-2688910 Brachypodium distachyon
Bradi2g03760 2.0kb downstream 2.0kb downstream 3917 true Bd2: 2682994-2686910 Brachypodium distachyon
Bradi2g03760 2.0kb downstream 2.0kb downstream 2000 false Bd2: 2682994-2684993 Brachypodium distachyon
Bradi2g03760 5.0kb upstream 5.0kb upstream 6917 true Bd2: 2684994-2691910 Brachypodium distachyon
Bradi2g03760 5.0kb upstream 5.0kb upstream 5000 false Bd2: 2686911-2691910 Brachypodium distachyon
Bradi2g03760 5.0kb downstream 5.0kb downstream 6917 true Bd2: 2679994-2686910 Brachypodium distachyon
Bradi2g03760 5.0kb downstream 5.0kb downstream 5000 false Bd2: 2679994-2684993 Brachypodium distachyon
Bradi2g03760 10.0kb upstream 10.0kb upstream 11917 true Bd2: 2684994-2696910 Brachypodium distachyon
Bradi2g03760 10.0kb upstream 10.0kb upstream 10000 false Bd2: 2686911-2696910 Brachypodium distachyon
Bradi2g03760 10.0kb downstream 10.0kb downstream 11917 true Bd2: 2674994-2686910 Brachypodium distachyon
Bradi2g03760 10.0kb downstream 10.0kb downstream 10000 false Bd2: 2674994-2684993 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124586912 5269 Grass View MSA
122048966 5273 Angiosperm View MSA
121345669 5274 Embryophyte View MSA
123423957 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 81.714     High  
cufflinks 102.644     High  
cufflinks 88.343     High  
cufflinks 89.119     High  
cufflinks 60.083     High  
cufflinks 93.102     High  
cufflinks 108.239     High  
cufflinks 83.532     High  
cufflinks 89.094     High  
cufflinks 92.085     High  
cufflinks 17.019     High Low
cufflinks 69.875     High  
cufflinks 12.486     High Low
cufflinks 15.961     High Low
cufflinks 36.664     High  
cufflinks 98.996     High  
cufflinks 111.395     High  
cufflinks 165.157     High High
cufflinks 112.007     High  
cufflinks 23.339     High Low
cufflinks 118.07     High  
cufflinks 74.135     High  
cufflinks 69.803     High  
cufflinks 72.216     High  
cufflinks 96.501     High  
cufflinks 74.17     High  
cufflinks 23.51     High Low
cufflinks 78.045     High  
cufflinks 73.347     High  
cufflinks 116.141     High  

0 Strain