Gene : Bradi2g03820 B. distachyon v3.1
Defline:  (1 of 1) PTHR15217//PTHR15217:SF0 - WILMS' TUMOR 1-ASSOCIATING PROTEIN // PRE-MRNA-SPLICING REGULATOR WTAP Genomic Order:  488
Name:  ? Bradi2g03820 Secondary Identifier:  ? PAC:32773677
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g03820 0.5kb upstream 0.5kb upstream 5996 true Bd2: 2709787-2715782 Brachypodium distachyon
Bradi2g03820 0.5kb upstream 0.5kb upstream 500 false Bd2: 2709787-2710286 Brachypodium distachyon
Bradi2g03820 0.5kb downstream 0.5kb downstream 5996 true Bd2: 2710287-2716282 Brachypodium distachyon
Bradi2g03820 0.5kb downstream 0.5kb downstream 500 false Bd2: 2715783-2716282 Brachypodium distachyon
Bradi2g03820 1.0kb upstream 1.0kb upstream 6496 true Bd2: 2709287-2715782 Brachypodium distachyon
Bradi2g03820 1.0kb upstream 1.0kb upstream 1000 false Bd2: 2709287-2710286 Brachypodium distachyon
Bradi2g03820 1.0kb downstream 1.0kb downstream 6496 true Bd2: 2710287-2716782 Brachypodium distachyon
Bradi2g03820 1.0kb downstream 1.0kb downstream 1000 false Bd2: 2715783-2716782 Brachypodium distachyon
Bradi2g03820 2.0kb upstream 2.0kb upstream 7496 true Bd2: 2708287-2715782 Brachypodium distachyon
Bradi2g03820 2.0kb upstream 2.0kb upstream 2000 false Bd2: 2708287-2710286 Brachypodium distachyon
Bradi2g03820 2.0kb downstream 2.0kb downstream 7496 true Bd2: 2710287-2717782 Brachypodium distachyon
Bradi2g03820 2.0kb downstream 2.0kb downstream 2000 false Bd2: 2715783-2717782 Brachypodium distachyon
Bradi2g03820 5.0kb upstream 5.0kb upstream 10496 true Bd2: 2705287-2715782 Brachypodium distachyon
Bradi2g03820 5.0kb upstream 5.0kb upstream 5000 false Bd2: 2705287-2710286 Brachypodium distachyon
Bradi2g03820 5.0kb downstream 5.0kb downstream 10496 true Bd2: 2710287-2720782 Brachypodium distachyon
Bradi2g03820 5.0kb downstream 5.0kb downstream 5000 false Bd2: 2715783-2720782 Brachypodium distachyon
Bradi2g03820 10.0kb upstream 10.0kb upstream 15496 true Bd2: 2700287-2715782 Brachypodium distachyon
Bradi2g03820 10.0kb upstream 10.0kb upstream 10000 false Bd2: 2700287-2710286 Brachypodium distachyon
Bradi2g03820 10.0kb downstream 10.0kb downstream 15496 true Bd2: 2710287-2725782 Brachypodium distachyon
Bradi2g03820 10.0kb downstream 10.0kb downstream 10000 false Bd2: 2715783-2725782 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569086 5269 Grass View MSA
122047600 5273 Angiosperm View MSA
123429059 5275 Viridiplantae View MSA
121346918 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.527        
cufflinks 5.035        
cufflinks 6.091       High
cufflinks 3.971        
cufflinks 3.528        
cufflinks 4.27        
cufflinks 4.241        
cufflinks 4.175        
cufflinks 4.437        
cufflinks 4.385        
cufflinks 3.945        
cufflinks 3.741        
cufflinks 3.261        
cufflinks 3.167        
cufflinks 2.732       Low
cufflinks 4.827        
cufflinks 5.143        
cufflinks 7.466       High
cufflinks 6.601       High
cufflinks 3.019        
cufflinks 6.061       High
cufflinks 6.027       High
cufflinks 4.161        
cufflinks 4.316        
cufflinks 4.22        
cufflinks 5.46        
cufflinks 3.794        
cufflinks 5.68        
cufflinks 5.238        
cufflinks 4.921        

0 Strain