Gene : Bradi2g03807 B. distachyon v3.1
Defline:  (1 of 1) PTHR22835//PTHR22835:SF207 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN Genomic Order:  487
Name:  ? Bradi2g03807 Secondary Identifier:  ? PAC:32776763
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon LIPAS-PWY Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g03807 0.5kb upstream 0.5kb upstream 2179 true Bd2: 2706661-2708839 Brachypodium distachyon
Bradi2g03807 0.5kb upstream 0.5kb upstream 500 false Bd2: 2708340-2708839 Brachypodium distachyon
Bradi2g03807 0.5kb downstream 0.5kb downstream 2179 true Bd2: 2706161-2708339 Brachypodium distachyon
Bradi2g03807 0.5kb downstream 0.5kb downstream 500 false Bd2: 2706161-2706660 Brachypodium distachyon
Bradi2g03807 1.0kb upstream 1.0kb upstream 2679 true Bd2: 2706661-2709339 Brachypodium distachyon
Bradi2g03807 1.0kb upstream 1.0kb upstream 1000 false Bd2: 2708340-2709339 Brachypodium distachyon
Bradi2g03807 1.0kb downstream 1.0kb downstream 2679 true Bd2: 2705661-2708339 Brachypodium distachyon
Bradi2g03807 1.0kb downstream 1.0kb downstream 1000 false Bd2: 2705661-2706660 Brachypodium distachyon
Bradi2g03807 2.0kb upstream 2.0kb upstream 3679 true Bd2: 2706661-2710339 Brachypodium distachyon
Bradi2g03807 2.0kb upstream 2.0kb upstream 2000 false Bd2: 2708340-2710339 Brachypodium distachyon
Bradi2g03807 2.0kb downstream 2.0kb downstream 3679 true Bd2: 2704661-2708339 Brachypodium distachyon
Bradi2g03807 2.0kb downstream 2.0kb downstream 2000 false Bd2: 2704661-2706660 Brachypodium distachyon
Bradi2g03807 5.0kb upstream 5.0kb upstream 6679 true Bd2: 2706661-2713339 Brachypodium distachyon
Bradi2g03807 5.0kb upstream 5.0kb upstream 5000 false Bd2: 2708340-2713339 Brachypodium distachyon
Bradi2g03807 5.0kb downstream 5.0kb downstream 6679 true Bd2: 2701661-2708339 Brachypodium distachyon
Bradi2g03807 5.0kb downstream 5.0kb downstream 5000 false Bd2: 2701661-2706660 Brachypodium distachyon
Bradi2g03807 10.0kb upstream 10.0kb upstream 11679 true Bd2: 2706661-2718339 Brachypodium distachyon
Bradi2g03807 10.0kb upstream 10.0kb upstream 10000 false Bd2: 2708340-2718339 Brachypodium distachyon
Bradi2g03807 10.0kb downstream 10.0kb downstream 11679 true Bd2: 2696661-2708339 Brachypodium distachyon
Bradi2g03807 10.0kb downstream 10.0kb downstream 10000 false Bd2: 2696661-2706660 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124585315 5269 Grass View MSA
122042489 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.839        
cufflinks 3.375        
cufflinks 3.343        
cufflinks 2.961        
cufflinks 1.195        
cufflinks 3.67        
cufflinks 3.455        
cufflinks 3.391        
cufflinks 3.019        
cufflinks 3.668        
cufflinks 0.124       Low
cufflinks 2.311        
cufflinks 0.61        
cufflinks 0.048     Low Low
cufflinks 0.737        
cufflinks 3.285        
cufflinks 2.297        
cufflinks 0.053     Low Low
cufflinks 1.664        
cufflinks 0.084     Low Low
cufflinks 7.083       High
cufflinks 3.228        
cufflinks 3.383        
cufflinks 2.131        
cufflinks 3.035        
cufflinks 3.552        
cufflinks 0.381        
cufflinks 3.334        
cufflinks 3.305        
cufflinks 5.589       High

0 Strain