Gene : Bradi2g03970 B. distachyon v3.1
Defline:  (1 of 1) PTHR12320:SF7 - PROTEIN PHOSPHATASE 2C 26-RELATED Genomic Order:  508
Name:  ? Bradi2g03970 Secondary Identifier:  ? PAC:32777144
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g03970 0.5kb upstream 0.5kb upstream 3616 true Bd2: 2798063-2801678 Brachypodium distachyon
Bradi2g03970 0.5kb upstream 0.5kb upstream 500 false Bd2: 2801179-2801678 Brachypodium distachyon
Bradi2g03970 0.5kb downstream 0.5kb downstream 3616 true Bd2: 2797563-2801178 Brachypodium distachyon
Bradi2g03970 0.5kb downstream 0.5kb downstream 500 false Bd2: 2797563-2798062 Brachypodium distachyon
Bradi2g03970 1.0kb upstream 1.0kb upstream 4116 true Bd2: 2798063-2802178 Brachypodium distachyon
Bradi2g03970 1.0kb upstream 1.0kb upstream 1000 false Bd2: 2801179-2802178 Brachypodium distachyon
Bradi2g03970 1.0kb downstream 1.0kb downstream 4116 true Bd2: 2797063-2801178 Brachypodium distachyon
Bradi2g03970 1.0kb downstream 1.0kb downstream 1000 false Bd2: 2797063-2798062 Brachypodium distachyon
Bradi2g03970 2.0kb upstream 2.0kb upstream 5116 true Bd2: 2798063-2803178 Brachypodium distachyon
Bradi2g03970 2.0kb upstream 2.0kb upstream 2000 false Bd2: 2801179-2803178 Brachypodium distachyon
Bradi2g03970 2.0kb downstream 2.0kb downstream 5116 true Bd2: 2796063-2801178 Brachypodium distachyon
Bradi2g03970 2.0kb downstream 2.0kb downstream 2000 false Bd2: 2796063-2798062 Brachypodium distachyon
Bradi2g03970 5.0kb upstream 5.0kb upstream 8116 true Bd2: 2798063-2806178 Brachypodium distachyon
Bradi2g03970 5.0kb upstream 5.0kb upstream 5000 false Bd2: 2801179-2806178 Brachypodium distachyon
Bradi2g03970 5.0kb downstream 5.0kb downstream 8116 true Bd2: 2793063-2801178 Brachypodium distachyon
Bradi2g03970 5.0kb downstream 5.0kb downstream 5000 false Bd2: 2793063-2798062 Brachypodium distachyon
Bradi2g03970 10.0kb upstream 10.0kb upstream 13116 true Bd2: 2798063-2811178 Brachypodium distachyon
Bradi2g03970 10.0kb upstream 10.0kb upstream 10000 false Bd2: 2801179-2811178 Brachypodium distachyon
Bradi2g03970 10.0kb downstream 10.0kb downstream 13116 true Bd2: 2788063-2801178 Brachypodium distachyon
Bradi2g03970 10.0kb downstream 10.0kb downstream 10000 false Bd2: 2788063-2798062 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572026 5269 Grass View MSA
122044601 5273 Angiosperm View MSA
121346475 5274 Embryophyte View MSA
123428574 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.518     High  
cufflinks 29.262     High  
cufflinks 33.931     High  
cufflinks 36.976     High  
cufflinks 21.955     High  
cufflinks 26.474     High  
cufflinks 24.878     High  
cufflinks 22.647     High  
cufflinks 24.13     High  
cufflinks 33.645     High  
cufflinks 29.424     High  
cufflinks 23.546     High  
cufflinks 22.545     High  
cufflinks 27.137     High  
cufflinks 29.816     High  
cufflinks 27.29     High  
cufflinks 28.113     High  
cufflinks 2.295       Low
cufflinks 9.584       Low
cufflinks 7.777       Low
cufflinks 12.606     High  
cufflinks 26.429     High  
cufflinks 23.498     High  
cufflinks 26.465     High  
cufflinks 28.015     High  
cufflinks 40.763     High  
cufflinks 24.84     High  
cufflinks 36.635     High  
cufflinks 33.818     High  
cufflinks 16.037     High  

0 Strain