Gene : Bradi2g04020 B. distachyon v3.1
Defline:  (1 of 2) PTHR11040//PTHR11040:SF23 - ZINC/IRON TRANSPORTER // SUBFAMILY NOT NAMED Genomic Order:  516
Name:  ? Bradi2g04020 Secondary Identifier:  ? PAC:32782133
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g04020 0.5kb upstream 0.5kb upstream 2373 true Bd2: 2842443-2844815 Brachypodium distachyon
Bradi2g04020 0.5kb upstream 0.5kb upstream 500 false Bd2: 2844316-2844815 Brachypodium distachyon
Bradi2g04020 0.5kb downstream 0.5kb downstream 2373 true Bd2: 2841943-2844315 Brachypodium distachyon
Bradi2g04020 0.5kb downstream 0.5kb downstream 500 false Bd2: 2841943-2842442 Brachypodium distachyon
Bradi2g04020 1.0kb upstream 1.0kb upstream 2873 true Bd2: 2842443-2845315 Brachypodium distachyon
Bradi2g04020 1.0kb upstream 1.0kb upstream 1000 false Bd2: 2844316-2845315 Brachypodium distachyon
Bradi2g04020 1.0kb downstream 1.0kb downstream 2873 true Bd2: 2841443-2844315 Brachypodium distachyon
Bradi2g04020 1.0kb downstream 1.0kb downstream 1000 false Bd2: 2841443-2842442 Brachypodium distachyon
Bradi2g04020 2.0kb upstream 2.0kb upstream 3873 true Bd2: 2842443-2846315 Brachypodium distachyon
Bradi2g04020 2.0kb upstream 2.0kb upstream 2000 false Bd2: 2844316-2846315 Brachypodium distachyon
Bradi2g04020 2.0kb downstream 2.0kb downstream 3873 true Bd2: 2840443-2844315 Brachypodium distachyon
Bradi2g04020 2.0kb downstream 2.0kb downstream 2000 false Bd2: 2840443-2842442 Brachypodium distachyon
Bradi2g04020 5.0kb upstream 5.0kb upstream 6873 true Bd2: 2842443-2849315 Brachypodium distachyon
Bradi2g04020 5.0kb upstream 5.0kb upstream 5000 false Bd2: 2844316-2849315 Brachypodium distachyon
Bradi2g04020 5.0kb downstream 5.0kb downstream 6873 true Bd2: 2837443-2844315 Brachypodium distachyon
Bradi2g04020 5.0kb downstream 5.0kb downstream 5000 false Bd2: 2837443-2842442 Brachypodium distachyon
Bradi2g04020 10.0kb upstream 10.0kb upstream 11873 true Bd2: 2842443-2854315 Brachypodium distachyon
Bradi2g04020 10.0kb upstream 10.0kb upstream 10000 false Bd2: 2844316-2854315 Brachypodium distachyon
Bradi2g04020 10.0kb downstream 10.0kb downstream 11873 true Bd2: 2832443-2844315 Brachypodium distachyon
Bradi2g04020 10.0kb downstream 10.0kb downstream 10000 false Bd2: 2832443-2842442 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576027 5269 Grass View MSA
122044792 5273 Angiosperm View MSA
121349012 5274 Embryophyte View MSA
123428132 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.05     Low  
cufflinks 0.053     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.009     Low  
cufflinks 0.021     Low  
cufflinks 0.008     Low Low
cufflinks 0.027     Low  
cufflinks 0.008     Low Low
cufflinks 0.009     Low  
cufflinks 0.017     Low  
cufflinks 0.027     Low  
cufflinks 0.012     Low  
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.081     Low  
cufflinks 1.14       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.029     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low  
cufflinks 0.012     Low  
cufflinks 0.014     Low  
cufflinks 0.027     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.066     Low  
cufflinks 0.035     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain