Gene : Bradi2g04070 B. distachyon v3.1

Defline:  (1 of 3) 3.1.31.1 - Micrococcal nuclease / Micrococcal endonuclease Genomic Order:  524
Name:  ? Bradi2g04070 Secondary Identifier:  ? PAC:32777098

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g04070 0.5kb upstream 0.5kb upstream 3584 true Bd2: 2870149-2873732 Brachypodium distachyon
Bradi2g04070 0.5kb upstream 0.5kb upstream 500 false Bd2: 2870149-2870648 Brachypodium distachyon
Bradi2g04070 0.5kb downstream 0.5kb downstream 3584 true Bd2: 2870649-2874232 Brachypodium distachyon
Bradi2g04070 0.5kb downstream 0.5kb downstream 500 false Bd2: 2873733-2874232 Brachypodium distachyon
Bradi2g04070 1.0kb upstream 1.0kb upstream 4084 true Bd2: 2869649-2873732 Brachypodium distachyon
Bradi2g04070 1.0kb upstream 1.0kb upstream 1000 false Bd2: 2869649-2870648 Brachypodium distachyon
Bradi2g04070 1.0kb downstream 1.0kb downstream 4084 true Bd2: 2870649-2874732 Brachypodium distachyon
Bradi2g04070 1.0kb downstream 1.0kb downstream 1000 false Bd2: 2873733-2874732 Brachypodium distachyon
Bradi2g04070 2.0kb upstream 2.0kb upstream 5084 true Bd2: 2868649-2873732 Brachypodium distachyon
Bradi2g04070 2.0kb upstream 2.0kb upstream 2000 false Bd2: 2868649-2870648 Brachypodium distachyon
Bradi2g04070 2.0kb downstream 2.0kb downstream 5084 true Bd2: 2870649-2875732 Brachypodium distachyon
Bradi2g04070 2.0kb downstream 2.0kb downstream 2000 false Bd2: 2873733-2875732 Brachypodium distachyon
Bradi2g04070 5.0kb upstream 5.0kb upstream 8084 true Bd2: 2865649-2873732 Brachypodium distachyon
Bradi2g04070 5.0kb upstream 5.0kb upstream 5000 false Bd2: 2865649-2870648 Brachypodium distachyon
Bradi2g04070 5.0kb downstream 5.0kb downstream 8084 true Bd2: 2870649-2878732 Brachypodium distachyon
Bradi2g04070 5.0kb downstream 5.0kb downstream 5000 false Bd2: 2873733-2878732 Brachypodium distachyon
Bradi2g04070 10.0kb upstream 10.0kb upstream 13084 true Bd2: 2860649-2873732 Brachypodium distachyon
Bradi2g04070 10.0kb upstream 10.0kb upstream 10000 false Bd2: 2860649-2870648 Brachypodium distachyon
Bradi2g04070 10.0kb downstream 10.0kb downstream 13084 true Bd2: 2870649-2883732 Brachypodium distachyon
Bradi2g04070 10.0kb downstream 10.0kb downstream 10000 false Bd2: 2873733-2883732 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582244 5269 Grass View MSA
122046760 5273 Angiosperm View MSA
121347603 5274 Embryophyte View MSA
123428455 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 57.424     High High
cufflinks 5.827        
cufflinks 5.605        
cufflinks 6.035        
cufflinks 21.23     High High
cufflinks 4.405        
cufflinks 4.973        
cufflinks 4.958        
cufflinks 4.784        
cufflinks 6.92        
cufflinks 3.135        
cufflinks 3.599        
cufflinks 1.934       Low
cufflinks 1.929       Low
cufflinks 6.129        
cufflinks 4.341        
cufflinks 6.238        
cufflinks 6.924        
cufflinks 23.896     High High
cufflinks 60.637     High High
cufflinks 8.447        
cufflinks 4.813        
cufflinks 5.944        
cufflinks 4.532        
cufflinks 5.104        
cufflinks 5.729        
cufflinks 1.649       Low
cufflinks 6.577        
cufflinks 5.571        
cufflinks 7.337        

0 Strain