Gene : Bradi2g04280 B. distachyon v3.1
Defline:  (1 of 1) PTHR16212:SF4 - FOCADHESIN Genomic Order:  551
Name:  ? Bradi2g04280 Secondary Identifier:  ? PAC:32772648
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g04280 0.5kb upstream 0.5kb upstream 18043 true Bd2: 3011058-3029100 Brachypodium distachyon
Bradi2g04280 0.5kb upstream 0.5kb upstream 500 false Bd2: 3028601-3029100 Brachypodium distachyon
Bradi2g04280 0.5kb downstream 0.5kb downstream 18043 true Bd2: 3010558-3028600 Brachypodium distachyon
Bradi2g04280 0.5kb downstream 0.5kb downstream 500 false Bd2: 3010558-3011057 Brachypodium distachyon
Bradi2g04280 1.0kb upstream 1.0kb upstream 18543 true Bd2: 3011058-3029600 Brachypodium distachyon
Bradi2g04280 1.0kb upstream 1.0kb upstream 1000 false Bd2: 3028601-3029600 Brachypodium distachyon
Bradi2g04280 1.0kb downstream 1.0kb downstream 18543 true Bd2: 3010058-3028600 Brachypodium distachyon
Bradi2g04280 1.0kb downstream 1.0kb downstream 1000 false Bd2: 3010058-3011057 Brachypodium distachyon
Bradi2g04280 2.0kb upstream 2.0kb upstream 19543 true Bd2: 3011058-3030600 Brachypodium distachyon
Bradi2g04280 2.0kb upstream 2.0kb upstream 2000 false Bd2: 3028601-3030600 Brachypodium distachyon
Bradi2g04280 2.0kb downstream 2.0kb downstream 19543 true Bd2: 3009058-3028600 Brachypodium distachyon
Bradi2g04280 2.0kb downstream 2.0kb downstream 2000 false Bd2: 3009058-3011057 Brachypodium distachyon
Bradi2g04280 5.0kb upstream 5.0kb upstream 22543 true Bd2: 3011058-3033600 Brachypodium distachyon
Bradi2g04280 5.0kb upstream 5.0kb upstream 5000 false Bd2: 3028601-3033600 Brachypodium distachyon
Bradi2g04280 5.0kb downstream 5.0kb downstream 22543 true Bd2: 3006058-3028600 Brachypodium distachyon
Bradi2g04280 5.0kb downstream 5.0kb downstream 5000 false Bd2: 3006058-3011057 Brachypodium distachyon
Bradi2g04280 10.0kb upstream 10.0kb upstream 27543 true Bd2: 3011058-3038600 Brachypodium distachyon
Bradi2g04280 10.0kb upstream 10.0kb upstream 10000 false Bd2: 3028601-3038600 Brachypodium distachyon
Bradi2g04280 10.0kb downstream 10.0kb downstream 27543 true Bd2: 3001058-3028600 Brachypodium distachyon
Bradi2g04280 10.0kb downstream 10.0kb downstream 10000 false Bd2: 3001058-3011057 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124585241 5269 Grass View MSA
122044820 5273 Angiosperm View MSA
121344294 5274 Embryophyte View MSA
123424915 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.067     Low  
cufflinks 0.213        
cufflinks 0.243       High
cufflinks 0.149        
cufflinks 0.027     Low Low
cufflinks 0.179        
cufflinks 0.158        
cufflinks 0.131        
cufflinks 0.17        
cufflinks 0.095     Low  
cufflinks 0.151        
cufflinks 0.167        
cufflinks 0.122        
cufflinks 0.094        
cufflinks 0.055     Low Low
cufflinks 0.182        
cufflinks 0.047     Low Low
cufflinks 0.299       High
cufflinks 0.071     Low  
cufflinks 0.03     Low Low
cufflinks 0.085     Low  
cufflinks 0.205        
cufflinks 0.133        
cufflinks 0.125        
cufflinks 0.116        
cufflinks 0.198        
cufflinks 0.15        
cufflinks 0.186        
cufflinks 0.189        
cufflinks 0.167        

0 Strain