Gene : Bradi2g00810 B. distachyon v3.1
Defline:  (1 of 2) PTHR33428//PTHR33428:SF2 - FAMILY NOT NAMED // CHLOROPHYLLASE-1 Genomic Order:  88
Name:  ? Bradi2g00810 Secondary Identifier:  ? PAC:32775344
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-5098 Brachypodium distachyon pathologic  
Bdistachyon PWY-6927 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g00810 0.5kb upstream 0.5kb upstream 1790 true Bd2: 495084-496873 Brachypodium distachyon
Bradi2g00810 0.5kb upstream 0.5kb upstream 500 false Bd2: 495084-495583 Brachypodium distachyon
Bradi2g00810 0.5kb downstream 0.5kb downstream 1790 true Bd2: 495584-497373 Brachypodium distachyon
Bradi2g00810 0.5kb downstream 0.5kb downstream 500 false Bd2: 496874-497373 Brachypodium distachyon
Bradi2g00810 1.0kb upstream 1.0kb upstream 2290 true Bd2: 494584-496873 Brachypodium distachyon
Bradi2g00810 1.0kb upstream 1.0kb upstream 1000 false Bd2: 494584-495583 Brachypodium distachyon
Bradi2g00810 1.0kb downstream 1.0kb downstream 2290 true Bd2: 495584-497873 Brachypodium distachyon
Bradi2g00810 1.0kb downstream 1.0kb downstream 1000 false Bd2: 496874-497873 Brachypodium distachyon
Bradi2g00810 2.0kb upstream 2.0kb upstream 3290 true Bd2: 493584-496873 Brachypodium distachyon
Bradi2g00810 2.0kb upstream 2.0kb upstream 2000 false Bd2: 493584-495583 Brachypodium distachyon
Bradi2g00810 2.0kb downstream 2.0kb downstream 3290 true Bd2: 495584-498873 Brachypodium distachyon
Bradi2g00810 2.0kb downstream 2.0kb downstream 2000 false Bd2: 496874-498873 Brachypodium distachyon
Bradi2g00810 5.0kb upstream 5.0kb upstream 6290 true Bd2: 490584-496873 Brachypodium distachyon
Bradi2g00810 5.0kb upstream 5.0kb upstream 5000 false Bd2: 490584-495583 Brachypodium distachyon
Bradi2g00810 5.0kb downstream 5.0kb downstream 6290 true Bd2: 495584-501873 Brachypodium distachyon
Bradi2g00810 5.0kb downstream 5.0kb downstream 5000 false Bd2: 496874-501873 Brachypodium distachyon
Bradi2g00810 10.0kb upstream 10.0kb upstream 11290 true Bd2: 485584-496873 Brachypodium distachyon
Bradi2g00810 10.0kb upstream 10.0kb upstream 10000 false Bd2: 485584-495583 Brachypodium distachyon
Bradi2g00810 10.0kb downstream 10.0kb downstream 11290 true Bd2: 495584-506873 Brachypodium distachyon
Bradi2g00810 10.0kb downstream 10.0kb downstream 10000 false Bd2: 496874-506873 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026648 5273 Angiosperm View MSA
124582543 5269 Grass View MSA
121296450 5274 Embryophyte View MSA
123428003 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain