Gene : Bradi2g02110 B. distachyon v3.1
Defline:  (1 of 1) PTHR12804//PTHR12804:SF2 - MICROSOMAL SIGNAL PEPTIDASE 23 KD SUBUNIT SPC22/23 Genomic Order:  257
Name:  ? Bradi2g02110 Secondary Identifier:  ? PAC:32781893
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g02110 0.5kb upstream 0.5kb upstream 3325 true Bd2: 1447273-1450597 Brachypodium distachyon
Bradi2g02110 0.5kb upstream 0.5kb upstream 500 false Bd2: 1447273-1447772 Brachypodium distachyon
Bradi2g02110 0.5kb downstream 0.5kb downstream 3325 true Bd2: 1447773-1451097 Brachypodium distachyon
Bradi2g02110 0.5kb downstream 0.5kb downstream 500 false Bd2: 1450598-1451097 Brachypodium distachyon
Bradi2g02110 1.0kb upstream 1.0kb upstream 3825 true Bd2: 1446773-1450597 Brachypodium distachyon
Bradi2g02110 1.0kb upstream 1.0kb upstream 1000 false Bd2: 1446773-1447772 Brachypodium distachyon
Bradi2g02110 1.0kb downstream 1.0kb downstream 3825 true Bd2: 1447773-1451597 Brachypodium distachyon
Bradi2g02110 1.0kb downstream 1.0kb downstream 1000 false Bd2: 1450598-1451597 Brachypodium distachyon
Bradi2g02110 2.0kb upstream 2.0kb upstream 4825 true Bd2: 1445773-1450597 Brachypodium distachyon
Bradi2g02110 2.0kb upstream 2.0kb upstream 2000 false Bd2: 1445773-1447772 Brachypodium distachyon
Bradi2g02110 2.0kb downstream 2.0kb downstream 4825 true Bd2: 1447773-1452597 Brachypodium distachyon
Bradi2g02110 2.0kb downstream 2.0kb downstream 2000 false Bd2: 1450598-1452597 Brachypodium distachyon
Bradi2g02110 5.0kb upstream 5.0kb upstream 7825 true Bd2: 1442773-1450597 Brachypodium distachyon
Bradi2g02110 5.0kb upstream 5.0kb upstream 5000 false Bd2: 1442773-1447772 Brachypodium distachyon
Bradi2g02110 5.0kb downstream 5.0kb downstream 7825 true Bd2: 1447773-1455597 Brachypodium distachyon
Bradi2g02110 5.0kb downstream 5.0kb downstream 5000 false Bd2: 1450598-1455597 Brachypodium distachyon
Bradi2g02110 10.0kb upstream 10.0kb upstream 12825 true Bd2: 1437773-1450597 Brachypodium distachyon
Bradi2g02110 10.0kb upstream 10.0kb upstream 10000 false Bd2: 1437773-1447772 Brachypodium distachyon
Bradi2g02110 10.0kb downstream 10.0kb downstream 12825 true Bd2: 1447773-1460597 Brachypodium distachyon
Bradi2g02110 10.0kb downstream 10.0kb downstream 10000 false Bd2: 1450598-1460597 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028537 5273 Angiosperm View MSA
124568735 5269 Grass View MSA
121298008 5274 Embryophyte View MSA
123336014 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.529        
cufflinks 5.454        
cufflinks 4.922        
cufflinks 6.85        
cufflinks 6.192        
cufflinks 4.055        
cufflinks 4.734        
cufflinks 5.09        
cufflinks 4.898        
cufflinks 7.788        
cufflinks 3.112       Low
cufflinks 3.376       Low
cufflinks 2.371       Low
cufflinks 3.034       Low
cufflinks 5.094        
cufflinks 3.886        
cufflinks 8.292        
cufflinks 6.495        
cufflinks 9.637       High
cufflinks 3.458       Low
cufflinks 9.111       High
cufflinks 5.177        
cufflinks 5.264        
cufflinks 5.123        
cufflinks 5.294        
cufflinks 6.027        
cufflinks 2.848       Low
cufflinks 5.734        
cufflinks 6.023        
cufflinks 5.02        

0 Strain