Gene : Bradi2g02290 B. distachyon v3.1
Defline:  (1 of 16) PF00069//PF08263 - Protein kinase domain (Pkinase) // Leucine rich repeat N-terminal domain (LRRNT_2) Genomic Order:  280
Name:  ? Bradi2g02290 Secondary Identifier:  ? PAC:32772699
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g02290 0.5kb upstream 0.5kb upstream 3017 true Bd2: 1557925-1560941 Brachypodium distachyon
Bradi2g02290 0.5kb upstream 0.5kb upstream 500 false Bd2: 1557925-1558424 Brachypodium distachyon
Bradi2g02290 0.5kb downstream 0.5kb downstream 3017 true Bd2: 1558425-1561441 Brachypodium distachyon
Bradi2g02290 0.5kb downstream 0.5kb downstream 500 false Bd2: 1560942-1561441 Brachypodium distachyon
Bradi2g02290 1.0kb upstream 1.0kb upstream 3517 true Bd2: 1557425-1560941 Brachypodium distachyon
Bradi2g02290 1.0kb upstream 1.0kb upstream 1000 false Bd2: 1557425-1558424 Brachypodium distachyon
Bradi2g02290 1.0kb downstream 1.0kb downstream 3517 true Bd2: 1558425-1561941 Brachypodium distachyon
Bradi2g02290 1.0kb downstream 1.0kb downstream 1000 false Bd2: 1560942-1561941 Brachypodium distachyon
Bradi2g02290 2.0kb upstream 2.0kb upstream 4517 true Bd2: 1556425-1560941 Brachypodium distachyon
Bradi2g02290 2.0kb upstream 2.0kb upstream 2000 false Bd2: 1556425-1558424 Brachypodium distachyon
Bradi2g02290 2.0kb downstream 2.0kb downstream 4517 true Bd2: 1558425-1562941 Brachypodium distachyon
Bradi2g02290 2.0kb downstream 2.0kb downstream 2000 false Bd2: 1560942-1562941 Brachypodium distachyon
Bradi2g02290 5.0kb upstream 5.0kb upstream 7517 true Bd2: 1553425-1560941 Brachypodium distachyon
Bradi2g02290 5.0kb upstream 5.0kb upstream 5000 false Bd2: 1553425-1558424 Brachypodium distachyon
Bradi2g02290 5.0kb downstream 5.0kb downstream 7517 true Bd2: 1558425-1565941 Brachypodium distachyon
Bradi2g02290 5.0kb downstream 5.0kb downstream 5000 false Bd2: 1560942-1565941 Brachypodium distachyon
Bradi2g02290 10.0kb upstream 10.0kb upstream 12517 true Bd2: 1548425-1560941 Brachypodium distachyon
Bradi2g02290 10.0kb upstream 10.0kb upstream 10000 false Bd2: 1548425-1558424 Brachypodium distachyon
Bradi2g02290 10.0kb downstream 10.0kb downstream 12517 true Bd2: 1558425-1570941 Brachypodium distachyon
Bradi2g02290 10.0kb downstream 10.0kb downstream 10000 false Bd2: 1560942-1570941 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572513 5269 Grass View MSA
122046324 5273 Angiosperm View MSA
121348254 5274 Embryophyte View MSA
123380793 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.347        
cufflinks 2.395        
cufflinks 2.449        
cufflinks 2.659        
cufflinks 1.216        
cufflinks 2.514        
cufflinks 3.073        
cufflinks 2.479        
cufflinks 3.16        
cufflinks 2.309        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.656        
cufflinks 0.086       Low
cufflinks 0.007     Low Low
cufflinks 1.133        
cufflinks 3.121        
cufflinks 4.006        
cufflinks 1.717        
cufflinks 2.358        
cufflinks 0.195       Low
cufflinks 2.95        
cufflinks 2.35        
cufflinks 2.879        
cufflinks 3.112        
cufflinks 2.885        
cufflinks 1.746        
cufflinks 0.01     Low Low
cufflinks 2.53        
cufflinks 2.779        
cufflinks 5.579        

0 Strain