Gene : Bradi2g02687 B. distachyon v3.1
Defline:  (1 of 2) PTHR22504 - REPRESSOR OF RNA POLYMERASE III TRANSCRIPTION MAF1 Genomic Order:  337
Name:  ? Bradi2g02687 Secondary Identifier:  ? PAC:32776329
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g02687 0.5kb upstream 0.5kb upstream 4407 true Bd2: 1897224-1901630 Brachypodium distachyon
Bradi2g02687 0.5kb upstream 0.5kb upstream 500 false Bd2: 1897224-1897723 Brachypodium distachyon
Bradi2g02687 0.5kb downstream 0.5kb downstream 4407 true Bd2: 1897724-1902130 Brachypodium distachyon
Bradi2g02687 0.5kb downstream 0.5kb downstream 500 false Bd2: 1901631-1902130 Brachypodium distachyon
Bradi2g02687 1.0kb upstream 1.0kb upstream 4907 true Bd2: 1896724-1901630 Brachypodium distachyon
Bradi2g02687 1.0kb upstream 1.0kb upstream 1000 false Bd2: 1896724-1897723 Brachypodium distachyon
Bradi2g02687 1.0kb downstream 1.0kb downstream 4907 true Bd2: 1897724-1902630 Brachypodium distachyon
Bradi2g02687 1.0kb downstream 1.0kb downstream 1000 false Bd2: 1901631-1902630 Brachypodium distachyon
Bradi2g02687 2.0kb upstream 2.0kb upstream 5907 true Bd2: 1895724-1901630 Brachypodium distachyon
Bradi2g02687 2.0kb upstream 2.0kb upstream 2000 false Bd2: 1895724-1897723 Brachypodium distachyon
Bradi2g02687 2.0kb downstream 2.0kb downstream 5907 true Bd2: 1897724-1903630 Brachypodium distachyon
Bradi2g02687 2.0kb downstream 2.0kb downstream 2000 false Bd2: 1901631-1903630 Brachypodium distachyon
Bradi2g02687 5.0kb upstream 5.0kb upstream 8907 true Bd2: 1892724-1901630 Brachypodium distachyon
Bradi2g02687 5.0kb upstream 5.0kb upstream 5000 false Bd2: 1892724-1897723 Brachypodium distachyon
Bradi2g02687 5.0kb downstream 5.0kb downstream 8907 true Bd2: 1897724-1906630 Brachypodium distachyon
Bradi2g02687 5.0kb downstream 5.0kb downstream 5000 false Bd2: 1901631-1906630 Brachypodium distachyon
Bradi2g02687 10.0kb upstream 10.0kb upstream 13907 true Bd2: 1887724-1901630 Brachypodium distachyon
Bradi2g02687 10.0kb upstream 10.0kb upstream 10000 false Bd2: 1887724-1897723 Brachypodium distachyon
Bradi2g02687 10.0kb downstream 10.0kb downstream 13907 true Bd2: 1897724-1911630 Brachypodium distachyon
Bradi2g02687 10.0kb downstream 10.0kb downstream 10000 false Bd2: 1901631-1911630 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573497 5269 Grass View MSA
122047316 5273 Angiosperm View MSA
121345866 5274 Embryophyte View MSA
123424535 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.366       Low
cufflinks 1.042        
cufflinks 0.966        
cufflinks 1.073        
cufflinks 0.433       Low
cufflinks 0.794        
cufflinks 0.855        
cufflinks 0.54        
cufflinks 0.646        
cufflinks 0.953        
cufflinks 0.85        
cufflinks 0.86        
cufflinks 0.821        
cufflinks 0.793        
cufflinks 0.465        
cufflinks 0.639        
cufflinks 0.954        
cufflinks 0.422       Low
cufflinks 0.795        
cufflinks 0.145     Low Low
cufflinks 0.89        
cufflinks 0.775        
cufflinks 0.554        
cufflinks 0.699        
cufflinks 0.923        
cufflinks 1.347       High
cufflinks 1.216       High
cufflinks 1.037        
cufflinks 0.885        
cufflinks 0.786        

0 Strain