Gene : Bradi2g07400 B. distachyon v3.1
Defline:  (1 of 1) PF15375 - Domain of unknown function (DUF4602) (DUF4602) Genomic Order:  941
Name:  ? Bradi2g07400 Secondary Identifier:  ? PAC:32773628
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g07400 0.5kb upstream 0.5kb upstream 2860 true Bd2: 5758999-5761858 Brachypodium distachyon
Bradi2g07400 0.5kb upstream 0.5kb upstream 500 false Bd2: 5761359-5761858 Brachypodium distachyon
Bradi2g07400 0.5kb downstream 0.5kb downstream 2860 true Bd2: 5758499-5761358 Brachypodium distachyon
Bradi2g07400 0.5kb downstream 0.5kb downstream 500 false Bd2: 5758499-5758998 Brachypodium distachyon
Bradi2g07400 1.0kb upstream 1.0kb upstream 3360 true Bd2: 5758999-5762358 Brachypodium distachyon
Bradi2g07400 1.0kb upstream 1.0kb upstream 1000 false Bd2: 5761359-5762358 Brachypodium distachyon
Bradi2g07400 1.0kb downstream 1.0kb downstream 3360 true Bd2: 5757999-5761358 Brachypodium distachyon
Bradi2g07400 1.0kb downstream 1.0kb downstream 1000 false Bd2: 5757999-5758998 Brachypodium distachyon
Bradi2g07400 2.0kb upstream 2.0kb upstream 4360 true Bd2: 5758999-5763358 Brachypodium distachyon
Bradi2g07400 2.0kb upstream 2.0kb upstream 2000 false Bd2: 5761359-5763358 Brachypodium distachyon
Bradi2g07400 2.0kb downstream 2.0kb downstream 4360 true Bd2: 5756999-5761358 Brachypodium distachyon
Bradi2g07400 2.0kb downstream 2.0kb downstream 2000 false Bd2: 5756999-5758998 Brachypodium distachyon
Bradi2g07400 5.0kb upstream 5.0kb upstream 7360 true Bd2: 5758999-5766358 Brachypodium distachyon
Bradi2g07400 5.0kb upstream 5.0kb upstream 5000 false Bd2: 5761359-5766358 Brachypodium distachyon
Bradi2g07400 5.0kb downstream 5.0kb downstream 7360 true Bd2: 5753999-5761358 Brachypodium distachyon
Bradi2g07400 5.0kb downstream 5.0kb downstream 5000 false Bd2: 5753999-5758998 Brachypodium distachyon
Bradi2g07400 10.0kb upstream 10.0kb upstream 12360 true Bd2: 5758999-5771358 Brachypodium distachyon
Bradi2g07400 10.0kb upstream 10.0kb upstream 10000 false Bd2: 5761359-5771358 Brachypodium distachyon
Bradi2g07400 10.0kb downstream 10.0kb downstream 12360 true Bd2: 5748999-5761358 Brachypodium distachyon
Bradi2g07400 10.0kb downstream 10.0kb downstream 10000 false Bd2: 5748999-5758998 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124583554 5269 Grass View MSA
122045698 5273 Angiosperm View MSA
121344425 5274 Embryophyte View MSA
123427686 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.043        
cufflinks 7.349        
cufflinks 7.62        
cufflinks 8.819        
cufflinks 6.043        
cufflinks 6.301        
cufflinks 6.791        
cufflinks 5.229        
cufflinks 7.03        
cufflinks 7.71        
cufflinks 3.782       Low
cufflinks 5.37        
cufflinks 2.672       Low
cufflinks 3.212       Low
cufflinks 5.218        
cufflinks 6.265        
cufflinks 8.397        
cufflinks 8.698        
cufflinks 8.422        
cufflinks 4.88        
cufflinks 8.57        
cufflinks 6.71        
cufflinks 6.191        
cufflinks 5.761        
cufflinks 8.013        
cufflinks 7.4        
cufflinks 3.179       Low
cufflinks 7.904        
cufflinks 6.98        
cufflinks 9.139        

0 Strain