Gene : Bradi2g07890 B. distachyon v3.1
Defline:  (1 of 1) PTHR10774//PTHR10774:SF70 - EXTENDED SYNAPTOTAGMIN-RELATED Genomic Order:  1006
Name:  ? Bradi2g07890 Secondary Identifier:  ? PAC:32771893
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g07890 0.5kb upstream 0.5kb upstream 7561 true Bd2: 6272736-6280296 Brachypodium distachyon
Bradi2g07890 0.5kb upstream 0.5kb upstream 500 false Bd2: 6279797-6280296 Brachypodium distachyon
Bradi2g07890 0.5kb downstream 0.5kb downstream 7561 true Bd2: 6272236-6279796 Brachypodium distachyon
Bradi2g07890 0.5kb downstream 0.5kb downstream 500 false Bd2: 6272236-6272735 Brachypodium distachyon
Bradi2g07890 1.0kb upstream 1.0kb upstream 8061 true Bd2: 6272736-6280796 Brachypodium distachyon
Bradi2g07890 1.0kb upstream 1.0kb upstream 1000 false Bd2: 6279797-6280796 Brachypodium distachyon
Bradi2g07890 1.0kb downstream 1.0kb downstream 8061 true Bd2: 6271736-6279796 Brachypodium distachyon
Bradi2g07890 1.0kb downstream 1.0kb downstream 1000 false Bd2: 6271736-6272735 Brachypodium distachyon
Bradi2g07890 2.0kb upstream 2.0kb upstream 9061 true Bd2: 6272736-6281796 Brachypodium distachyon
Bradi2g07890 2.0kb upstream 2.0kb upstream 2000 false Bd2: 6279797-6281796 Brachypodium distachyon
Bradi2g07890 2.0kb downstream 2.0kb downstream 9061 true Bd2: 6270736-6279796 Brachypodium distachyon
Bradi2g07890 2.0kb downstream 2.0kb downstream 2000 false Bd2: 6270736-6272735 Brachypodium distachyon
Bradi2g07890 5.0kb upstream 5.0kb upstream 12061 true Bd2: 6272736-6284796 Brachypodium distachyon
Bradi2g07890 5.0kb upstream 5.0kb upstream 5000 false Bd2: 6279797-6284796 Brachypodium distachyon
Bradi2g07890 5.0kb downstream 5.0kb downstream 12061 true Bd2: 6267736-6279796 Brachypodium distachyon
Bradi2g07890 5.0kb downstream 5.0kb downstream 5000 false Bd2: 6267736-6272735 Brachypodium distachyon
Bradi2g07890 10.0kb upstream 10.0kb upstream 17061 true Bd2: 6272736-6289796 Brachypodium distachyon
Bradi2g07890 10.0kb upstream 10.0kb upstream 10000 false Bd2: 6279797-6289796 Brachypodium distachyon
Bradi2g07890 10.0kb downstream 10.0kb downstream 17061 true Bd2: 6262736-6279796 Brachypodium distachyon
Bradi2g07890 10.0kb downstream 10.0kb downstream 10000 false Bd2: 6262736-6272735 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571976 5269 Grass View MSA
122042334 5273 Angiosperm View MSA
121345597 5274 Embryophyte View MSA
123428781 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.925        
cufflinks 1.161        
cufflinks 1.35        
cufflinks 1.161        
cufflinks 0.874        
cufflinks 1.016        
cufflinks 1.007        
cufflinks 1.018        
cufflinks 1.066        
cufflinks 1.055        
cufflinks 0.448       Low
cufflinks 1.117        
cufflinks 0.449       Low
cufflinks 0.32       Low
cufflinks 0.668        
cufflinks 1.067        
cufflinks 1.357        
cufflinks 2.678       High
cufflinks 1.576        
cufflinks 0.406       Low
cufflinks 2.63       High
cufflinks 1.265        
cufflinks 1.072        
cufflinks 1.162        
cufflinks 1.147        
cufflinks 1.407        
cufflinks 0.377       Low
cufflinks 1.239        
cufflinks 1.228        
cufflinks 2.373       High

0 Strain