Gene : Bradi2g07911 B. distachyon v3.1
Defline:  (1 of 56) PF03101//PF10551 - FAR1 DNA-binding domain (FAR1) // MULE transposase domain (MULE) Genomic Order:  1008
Name:  ? Bradi2g07911 Secondary Identifier:  ? PAC:32776141
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g07911 0.5kb upstream 0.5kb upstream 3943 true Bd2: 6287038-6290980 Brachypodium distachyon
Bradi2g07911 0.5kb upstream 0.5kb upstream 500 false Bd2: 6290481-6290980 Brachypodium distachyon
Bradi2g07911 0.5kb downstream 0.5kb downstream 3943 true Bd2: 6286538-6290480 Brachypodium distachyon
Bradi2g07911 0.5kb downstream 0.5kb downstream 500 false Bd2: 6286538-6287037 Brachypodium distachyon
Bradi2g07911 1.0kb upstream 1.0kb upstream 4443 true Bd2: 6287038-6291480 Brachypodium distachyon
Bradi2g07911 1.0kb upstream 1.0kb upstream 1000 false Bd2: 6290481-6291480 Brachypodium distachyon
Bradi2g07911 1.0kb downstream 1.0kb downstream 4443 true Bd2: 6286038-6290480 Brachypodium distachyon
Bradi2g07911 1.0kb downstream 1.0kb downstream 1000 false Bd2: 6286038-6287037 Brachypodium distachyon
Bradi2g07911 2.0kb upstream 2.0kb upstream 5443 true Bd2: 6287038-6292480 Brachypodium distachyon
Bradi2g07911 2.0kb upstream 2.0kb upstream 2000 false Bd2: 6290481-6292480 Brachypodium distachyon
Bradi2g07911 2.0kb downstream 2.0kb downstream 5443 true Bd2: 6285038-6290480 Brachypodium distachyon
Bradi2g07911 2.0kb downstream 2.0kb downstream 2000 false Bd2: 6285038-6287037 Brachypodium distachyon
Bradi2g07911 5.0kb upstream 5.0kb upstream 8443 true Bd2: 6287038-6295480 Brachypodium distachyon
Bradi2g07911 5.0kb upstream 5.0kb upstream 5000 false Bd2: 6290481-6295480 Brachypodium distachyon
Bradi2g07911 5.0kb downstream 5.0kb downstream 8443 true Bd2: 6282038-6290480 Brachypodium distachyon
Bradi2g07911 5.0kb downstream 5.0kb downstream 5000 false Bd2: 6282038-6287037 Brachypodium distachyon
Bradi2g07911 10.0kb upstream 10.0kb upstream 13443 true Bd2: 6287038-6300480 Brachypodium distachyon
Bradi2g07911 10.0kb upstream 10.0kb upstream 10000 false Bd2: 6290481-6300480 Brachypodium distachyon
Bradi2g07911 10.0kb downstream 10.0kb downstream 13443 true Bd2: 6277038-6290480 Brachypodium distachyon
Bradi2g07911 10.0kb downstream 10.0kb downstream 10000 false Bd2: 6277038-6287037 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031606 5273 Angiosperm View MSA
124589040 5269 Grass View MSA
121300621 5274 Embryophyte View MSA
123338368 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.007     Low  
cufflinks 0.007     Low  
cufflinks 0.022     Low High
cufflinks 0.044     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.019     Low  
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 0.011     Low  
cufflinks 0.038     Low High

0 Strain