Gene : Bradi2g08490 B. distachyon v3.1
Defline:  (1 of 1) K07560 - D-tyrosyl-tRNA(Tyr) deacylase [EC:3.1.-.-] (dtd, DTD1) Genomic Order:  1082
Name:  ? Bradi2g08490 Secondary Identifier:  ? PAC:32772463
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g08490 0.5kb upstream 0.5kb upstream 3727 true Bd2: 6873327-6877053 Brachypodium distachyon
Bradi2g08490 0.5kb upstream 0.5kb upstream 500 false Bd2: 6876554-6877053 Brachypodium distachyon
Bradi2g08490 0.5kb downstream 0.5kb downstream 3727 true Bd2: 6872827-6876553 Brachypodium distachyon
Bradi2g08490 0.5kb downstream 0.5kb downstream 500 false Bd2: 6872827-6873326 Brachypodium distachyon
Bradi2g08490 1.0kb upstream 1.0kb upstream 4227 true Bd2: 6873327-6877553 Brachypodium distachyon
Bradi2g08490 1.0kb upstream 1.0kb upstream 1000 false Bd2: 6876554-6877553 Brachypodium distachyon
Bradi2g08490 1.0kb downstream 1.0kb downstream 4227 true Bd2: 6872327-6876553 Brachypodium distachyon
Bradi2g08490 1.0kb downstream 1.0kb downstream 1000 false Bd2: 6872327-6873326 Brachypodium distachyon
Bradi2g08490 2.0kb upstream 2.0kb upstream 5227 true Bd2: 6873327-6878553 Brachypodium distachyon
Bradi2g08490 2.0kb upstream 2.0kb upstream 2000 false Bd2: 6876554-6878553 Brachypodium distachyon
Bradi2g08490 2.0kb downstream 2.0kb downstream 5227 true Bd2: 6871327-6876553 Brachypodium distachyon
Bradi2g08490 2.0kb downstream 2.0kb downstream 2000 false Bd2: 6871327-6873326 Brachypodium distachyon
Bradi2g08490 5.0kb upstream 5.0kb upstream 8227 true Bd2: 6873327-6881553 Brachypodium distachyon
Bradi2g08490 5.0kb upstream 5.0kb upstream 5000 false Bd2: 6876554-6881553 Brachypodium distachyon
Bradi2g08490 5.0kb downstream 5.0kb downstream 8227 true Bd2: 6868327-6876553 Brachypodium distachyon
Bradi2g08490 5.0kb downstream 5.0kb downstream 5000 false Bd2: 6868327-6873326 Brachypodium distachyon
Bradi2g08490 10.0kb upstream 10.0kb upstream 13227 true Bd2: 6873327-6886553 Brachypodium distachyon
Bradi2g08490 10.0kb upstream 10.0kb upstream 10000 false Bd2: 6876554-6886553 Brachypodium distachyon
Bradi2g08490 10.0kb downstream 10.0kb downstream 13227 true Bd2: 6863327-6876553 Brachypodium distachyon
Bradi2g08490 10.0kb downstream 10.0kb downstream 10000 false Bd2: 6863327-6873326 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579029 5269 Grass View MSA
122044968 5273 Angiosperm View MSA
121347262 5274 Embryophyte View MSA
123424292 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.437       Low
cufflinks 0.953        
cufflinks 1.122        
cufflinks 1.11        
cufflinks 0.538       Low
cufflinks 0.793        
cufflinks 0.977        
cufflinks 0.725        
cufflinks 0.778        
cufflinks 1.262       High
cufflinks 0.866        
cufflinks 0.629        
cufflinks 0.81        
cufflinks 0.649        
cufflinks 0.546       Low
cufflinks 0.739        
cufflinks 0.71        
cufflinks 0.833        
cufflinks 0.911        
cufflinks 0.421       Low
cufflinks 0.818        
cufflinks 1.075        
cufflinks 0.616        
cufflinks 0.773        
cufflinks 0.952        
cufflinks 1.594       High
cufflinks 1.072        
cufflinks 1.405       High
cufflinks 1.373       High
cufflinks 0.721        

0 Strain