Gene : Bradi2g08370 B. distachyon v3.1
Defline:  (1 of 1) PTHR33785:SF1 - GENOMIC DNA, CHROMOSOME 3, BAC CLONE:F4B12 Genomic Order:  1066
Name:  ? Bradi2g08370 Secondary Identifier:  ? PAC:32776402
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g08370 0.5kb upstream 0.5kb upstream 2935 true Bd2: 6780838-6783772 Brachypodium distachyon
Bradi2g08370 0.5kb upstream 0.5kb upstream 500 false Bd2: 6780838-6781337 Brachypodium distachyon
Bradi2g08370 0.5kb downstream 0.5kb downstream 2935 true Bd2: 6781338-6784272 Brachypodium distachyon
Bradi2g08370 0.5kb downstream 0.5kb downstream 500 false Bd2: 6783773-6784272 Brachypodium distachyon
Bradi2g08370 1.0kb upstream 1.0kb upstream 3435 true Bd2: 6780338-6783772 Brachypodium distachyon
Bradi2g08370 1.0kb upstream 1.0kb upstream 1000 false Bd2: 6780338-6781337 Brachypodium distachyon
Bradi2g08370 1.0kb downstream 1.0kb downstream 3435 true Bd2: 6781338-6784772 Brachypodium distachyon
Bradi2g08370 1.0kb downstream 1.0kb downstream 1000 false Bd2: 6783773-6784772 Brachypodium distachyon
Bradi2g08370 2.0kb upstream 2.0kb upstream 4435 true Bd2: 6779338-6783772 Brachypodium distachyon
Bradi2g08370 2.0kb upstream 2.0kb upstream 2000 false Bd2: 6779338-6781337 Brachypodium distachyon
Bradi2g08370 2.0kb downstream 2.0kb downstream 4435 true Bd2: 6781338-6785772 Brachypodium distachyon
Bradi2g08370 2.0kb downstream 2.0kb downstream 2000 false Bd2: 6783773-6785772 Brachypodium distachyon
Bradi2g08370 5.0kb upstream 5.0kb upstream 7435 true Bd2: 6776338-6783772 Brachypodium distachyon
Bradi2g08370 5.0kb upstream 5.0kb upstream 5000 false Bd2: 6776338-6781337 Brachypodium distachyon
Bradi2g08370 5.0kb downstream 5.0kb downstream 7435 true Bd2: 6781338-6788772 Brachypodium distachyon
Bradi2g08370 5.0kb downstream 5.0kb downstream 5000 false Bd2: 6783773-6788772 Brachypodium distachyon
Bradi2g08370 10.0kb upstream 10.0kb upstream 12435 true Bd2: 6771338-6783772 Brachypodium distachyon
Bradi2g08370 10.0kb upstream 10.0kb upstream 10000 false Bd2: 6771338-6781337 Brachypodium distachyon
Bradi2g08370 10.0kb downstream 10.0kb downstream 12435 true Bd2: 6781338-6793772 Brachypodium distachyon
Bradi2g08370 10.0kb downstream 10.0kb downstream 10000 false Bd2: 6783773-6793772 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569088 5269 Grass View MSA
122048968 5273 Angiosperm View MSA
121350568 5274 Embryophyte View MSA
123381799 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.119        
cufflinks 1.57        
cufflinks 2.059        
cufflinks 1.837        
cufflinks 2.975        
cufflinks 0.74        
cufflinks 1.251        
cufflinks 0.76        
cufflinks 0.633       Low
cufflinks 1.498        
cufflinks 1.109        
cufflinks 0.536       Low
cufflinks 0.788        
cufflinks 0.683        
cufflinks 0.724        
cufflinks 0.602       Low
cufflinks 1.674        
cufflinks 1.411        
cufflinks 8.693       High
cufflinks 8.737       High
cufflinks 1.417        
cufflinks 1.34        
cufflinks 1.606        
cufflinks 0.848        
cufflinks 1.068        
cufflinks 1.794        
cufflinks 1.115        
cufflinks 2.101        
cufflinks 1.899        
cufflinks 1.049        

0 Strain