Gene : Bradi2g08860 B. distachyon v3.1
Defline:  (1 of 1) PTHR22938//PTHR22938:SF3 - ZINC FINGER PROTEIN 598 // SUBFAMILY NOT NAMED Genomic Order:  1139
Name:  ? Bradi2g08860 Secondary Identifier:  ? PAC:32777728
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g08860 0.5kb upstream 0.5kb upstream 5729 true Bd2: 7193127-7198855 Brachypodium distachyon
Bradi2g08860 0.5kb upstream 0.5kb upstream 500 false Bd2: 7193127-7193626 Brachypodium distachyon
Bradi2g08860 0.5kb downstream 0.5kb downstream 5729 true Bd2: 7193627-7199355 Brachypodium distachyon
Bradi2g08860 0.5kb downstream 0.5kb downstream 500 false Bd2: 7198856-7199355 Brachypodium distachyon
Bradi2g08860 1.0kb upstream 1.0kb upstream 6229 true Bd2: 7192627-7198855 Brachypodium distachyon
Bradi2g08860 1.0kb upstream 1.0kb upstream 1000 false Bd2: 7192627-7193626 Brachypodium distachyon
Bradi2g08860 1.0kb downstream 1.0kb downstream 6229 true Bd2: 7193627-7199855 Brachypodium distachyon
Bradi2g08860 1.0kb downstream 1.0kb downstream 1000 false Bd2: 7198856-7199855 Brachypodium distachyon
Bradi2g08860 2.0kb upstream 2.0kb upstream 7229 true Bd2: 7191627-7198855 Brachypodium distachyon
Bradi2g08860 2.0kb upstream 2.0kb upstream 2000 false Bd2: 7191627-7193626 Brachypodium distachyon
Bradi2g08860 2.0kb downstream 2.0kb downstream 7229 true Bd2: 7193627-7200855 Brachypodium distachyon
Bradi2g08860 2.0kb downstream 2.0kb downstream 2000 false Bd2: 7198856-7200855 Brachypodium distachyon
Bradi2g08860 5.0kb upstream 5.0kb upstream 10229 true Bd2: 7188627-7198855 Brachypodium distachyon
Bradi2g08860 5.0kb upstream 5.0kb upstream 5000 false Bd2: 7188627-7193626 Brachypodium distachyon
Bradi2g08860 5.0kb downstream 5.0kb downstream 10229 true Bd2: 7193627-7203855 Brachypodium distachyon
Bradi2g08860 5.0kb downstream 5.0kb downstream 5000 false Bd2: 7198856-7203855 Brachypodium distachyon
Bradi2g08860 10.0kb upstream 10.0kb upstream 15229 true Bd2: 7183627-7198855 Brachypodium distachyon
Bradi2g08860 10.0kb upstream 10.0kb upstream 10000 false Bd2: 7183627-7193626 Brachypodium distachyon
Bradi2g08860 10.0kb downstream 10.0kb downstream 15229 true Bd2: 7193627-7208855 Brachypodium distachyon
Bradi2g08860 10.0kb downstream 10.0kb downstream 10000 false Bd2: 7198856-7208855 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124567914 5269 Grass View MSA
122042596 5273 Angiosperm View MSA
121350951 5274 Embryophyte View MSA
123428352 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.682       Low
cufflinks 4.672        
cufflinks 4.724        
cufflinks 4.03        
cufflinks 3.133        
cufflinks 4.809        
cufflinks 3.994        
cufflinks 5.729        
cufflinks 5.193        
cufflinks 3.869        
cufflinks 4.593        
cufflinks 6.429       High
cufflinks 4.752        
cufflinks 4.199        
cufflinks 4.519        
cufflinks 4.283        
cufflinks 4.122        
cufflinks 4.53        
cufflinks 2.99       Low
cufflinks 3.207        
cufflinks 3.892        
cufflinks 5.233        
cufflinks 5.17        
cufflinks 4.67        
cufflinks 3.971        
cufflinks 4.449        
cufflinks 5.823        
cufflinks 4.657        
cufflinks 4.363        
cufflinks 4.015        

0 Strain