Gene : Bradi2g09102 B. distachyon v3.1
Defline:  (1 of 3) PTHR23308:SF34 - F16B3.3 PROTEIN Genomic Order:  1174
Name:  ? Bradi2g09102 Secondary Identifier:  ? PAC:32772052
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g09102 0.5kb upstream 0.5kb upstream 2970 true Bd2: 7416133-7419102 Brachypodium distachyon
Bradi2g09102 0.5kb upstream 0.5kb upstream 500 false Bd2: 7418603-7419102 Brachypodium distachyon
Bradi2g09102 0.5kb downstream 0.5kb downstream 2970 true Bd2: 7415633-7418602 Brachypodium distachyon
Bradi2g09102 0.5kb downstream 0.5kb downstream 500 false Bd2: 7415633-7416132 Brachypodium distachyon
Bradi2g09102 1.0kb upstream 1.0kb upstream 3470 true Bd2: 7416133-7419602 Brachypodium distachyon
Bradi2g09102 1.0kb upstream 1.0kb upstream 1000 false Bd2: 7418603-7419602 Brachypodium distachyon
Bradi2g09102 1.0kb downstream 1.0kb downstream 3470 true Bd2: 7415133-7418602 Brachypodium distachyon
Bradi2g09102 1.0kb downstream 1.0kb downstream 1000 false Bd2: 7415133-7416132 Brachypodium distachyon
Bradi2g09102 2.0kb upstream 2.0kb upstream 4470 true Bd2: 7416133-7420602 Brachypodium distachyon
Bradi2g09102 2.0kb upstream 2.0kb upstream 2000 false Bd2: 7418603-7420602 Brachypodium distachyon
Bradi2g09102 2.0kb downstream 2.0kb downstream 4470 true Bd2: 7414133-7418602 Brachypodium distachyon
Bradi2g09102 2.0kb downstream 2.0kb downstream 2000 false Bd2: 7414133-7416132 Brachypodium distachyon
Bradi2g09102 5.0kb upstream 5.0kb upstream 7470 true Bd2: 7416133-7423602 Brachypodium distachyon
Bradi2g09102 5.0kb upstream 5.0kb upstream 5000 false Bd2: 7418603-7423602 Brachypodium distachyon
Bradi2g09102 5.0kb downstream 5.0kb downstream 7470 true Bd2: 7411133-7418602 Brachypodium distachyon
Bradi2g09102 5.0kb downstream 5.0kb downstream 5000 false Bd2: 7411133-7416132 Brachypodium distachyon
Bradi2g09102 10.0kb upstream 10.0kb upstream 12470 true Bd2: 7416133-7428602 Brachypodium distachyon
Bradi2g09102 10.0kb upstream 10.0kb upstream 10000 false Bd2: 7418603-7428602 Brachypodium distachyon
Bradi2g09102 10.0kb downstream 10.0kb downstream 12470 true Bd2: 7406133-7418602 Brachypodium distachyon
Bradi2g09102 10.0kb downstream 10.0kb downstream 10000 false Bd2: 7406133-7416132 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124589543 5269 Grass View MSA
122045754 5273 Angiosperm View MSA
121310497 5274 Embryophyte View MSA
123427201 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.883        
cufflinks 0.961        
cufflinks 0.982        
cufflinks 1.055        
cufflinks 1.232        
cufflinks 0.874        
cufflinks 0.971        
cufflinks 0.805        
cufflinks 0.57        
cufflinks 0.995        
cufflinks 0.098       Low
cufflinks 0.768        
cufflinks 0.083       Low
cufflinks 0.076       Low
cufflinks 0.278        
cufflinks 0.797        
cufflinks 0.446        
cufflinks 2.314       High
cufflinks 1.563        
cufflinks 1.675        
cufflinks 0.796        
cufflinks 0.762        
cufflinks 0.811        
cufflinks 0.691        
cufflinks 0.881        
cufflinks 1.006        
cufflinks 0.131       Low
cufflinks 0.815        
cufflinks 0.828        
cufflinks 1.579        

0 Strain