Gene : Bradi2g09340 B. distachyon v3.1
Defline:  (1 of 1) PTHR12506//PTHR12506:SF26 - PROTEIN PHOSPHATASE RELATED // SUBFAMILY NOT NAMED Genomic Order:  1208
Name:  ? Bradi2g09340 Secondary Identifier:  ? PAC:32773199
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g09340 0.5kb upstream 0.5kb upstream 6298 true Bd2: 7629061-7635358 Brachypodium distachyon
Bradi2g09340 0.5kb upstream 0.5kb upstream 500 false Bd2: 7634859-7635358 Brachypodium distachyon
Bradi2g09340 0.5kb downstream 0.5kb downstream 6298 true Bd2: 7628561-7634858 Brachypodium distachyon
Bradi2g09340 0.5kb downstream 0.5kb downstream 500 false Bd2: 7628561-7629060 Brachypodium distachyon
Bradi2g09340 1.0kb upstream 1.0kb upstream 6798 true Bd2: 7629061-7635858 Brachypodium distachyon
Bradi2g09340 1.0kb upstream 1.0kb upstream 1000 false Bd2: 7634859-7635858 Brachypodium distachyon
Bradi2g09340 1.0kb downstream 1.0kb downstream 6798 true Bd2: 7628061-7634858 Brachypodium distachyon
Bradi2g09340 1.0kb downstream 1.0kb downstream 1000 false Bd2: 7628061-7629060 Brachypodium distachyon
Bradi2g09340 2.0kb upstream 2.0kb upstream 7798 true Bd2: 7629061-7636858 Brachypodium distachyon
Bradi2g09340 2.0kb upstream 2.0kb upstream 2000 false Bd2: 7634859-7636858 Brachypodium distachyon
Bradi2g09340 2.0kb downstream 2.0kb downstream 7798 true Bd2: 7627061-7634858 Brachypodium distachyon
Bradi2g09340 2.0kb downstream 2.0kb downstream 2000 false Bd2: 7627061-7629060 Brachypodium distachyon
Bradi2g09340 5.0kb upstream 5.0kb upstream 10798 true Bd2: 7629061-7639858 Brachypodium distachyon
Bradi2g09340 5.0kb upstream 5.0kb upstream 5000 false Bd2: 7634859-7639858 Brachypodium distachyon
Bradi2g09340 5.0kb downstream 5.0kb downstream 10798 true Bd2: 7624061-7634858 Brachypodium distachyon
Bradi2g09340 5.0kb downstream 5.0kb downstream 5000 false Bd2: 7624061-7629060 Brachypodium distachyon
Bradi2g09340 10.0kb upstream 10.0kb upstream 15798 true Bd2: 7629061-7644858 Brachypodium distachyon
Bradi2g09340 10.0kb upstream 10.0kb upstream 10000 false Bd2: 7634859-7644858 Brachypodium distachyon
Bradi2g09340 10.0kb downstream 10.0kb downstream 15798 true Bd2: 7619061-7634858 Brachypodium distachyon
Bradi2g09340 10.0kb downstream 10.0kb downstream 10000 false Bd2: 7619061-7629060 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124588177 5269 Grass View MSA
122047734 5273 Angiosperm View MSA
121348027 5274 Embryophyte View MSA
123428726 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.776        
cufflinks 0.984        
cufflinks 0.941        
cufflinks 0.848        
cufflinks 0.706        
cufflinks 0.779        
cufflinks 0.841        
cufflinks 0.84        
cufflinks 0.858        
cufflinks 0.549        
cufflinks 0.436       Low
cufflinks 0.826        
cufflinks 0.279       Low
cufflinks 0.286       Low
cufflinks 0.445        
cufflinks 0.794        
cufflinks 0.706        
cufflinks 0.793        
cufflinks 1.486       High
cufflinks 0.45        
cufflinks 0.685        
cufflinks 0.904        
cufflinks 0.831        
cufflinks 0.833        
cufflinks 0.775        
cufflinks 0.783        
cufflinks 0.463        
cufflinks 0.731        
cufflinks 0.773        
cufflinks 1.144       High

0 Strain