Gene : Bradi2g04847 B. distachyon v3.1
Defline:  (1 of 1) PTHR19241//PTHR19241:SF170 - ATP-BINDING CASSETTE TRANSPORTER Genomic Order:  629
Name:  ? Bradi2g04847 Secondary Identifier:  ? PAC:32773860
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g04847 0.5kb upstream 0.5kb upstream 13654 true Bd2: 3477155-3490808 Brachypodium distachyon
Bradi2g04847 0.5kb upstream 0.5kb upstream 500 false Bd2: 3490309-3490808 Brachypodium distachyon
Bradi2g04847 0.5kb downstream 0.5kb downstream 13654 true Bd2: 3476655-3490308 Brachypodium distachyon
Bradi2g04847 0.5kb downstream 0.5kb downstream 500 false Bd2: 3476655-3477154 Brachypodium distachyon
Bradi2g04847 1.0kb upstream 1.0kb upstream 14154 true Bd2: 3477155-3491308 Brachypodium distachyon
Bradi2g04847 1.0kb upstream 1.0kb upstream 1000 false Bd2: 3490309-3491308 Brachypodium distachyon
Bradi2g04847 1.0kb downstream 1.0kb downstream 14154 true Bd2: 3476155-3490308 Brachypodium distachyon
Bradi2g04847 1.0kb downstream 1.0kb downstream 1000 false Bd2: 3476155-3477154 Brachypodium distachyon
Bradi2g04847 2.0kb upstream 2.0kb upstream 15154 true Bd2: 3477155-3492308 Brachypodium distachyon
Bradi2g04847 2.0kb upstream 2.0kb upstream 2000 false Bd2: 3490309-3492308 Brachypodium distachyon
Bradi2g04847 2.0kb downstream 2.0kb downstream 15154 true Bd2: 3475155-3490308 Brachypodium distachyon
Bradi2g04847 2.0kb downstream 2.0kb downstream 2000 false Bd2: 3475155-3477154 Brachypodium distachyon
Bradi2g04847 5.0kb upstream 5.0kb upstream 18154 true Bd2: 3477155-3495308 Brachypodium distachyon
Bradi2g04847 5.0kb upstream 5.0kb upstream 5000 false Bd2: 3490309-3495308 Brachypodium distachyon
Bradi2g04847 5.0kb downstream 5.0kb downstream 18154 true Bd2: 3472155-3490308 Brachypodium distachyon
Bradi2g04847 5.0kb downstream 5.0kb downstream 5000 false Bd2: 3472155-3477154 Brachypodium distachyon
Bradi2g04847 10.0kb upstream 10.0kb upstream 23154 true Bd2: 3477155-3500308 Brachypodium distachyon
Bradi2g04847 10.0kb upstream 10.0kb upstream 10000 false Bd2: 3490309-3500308 Brachypodium distachyon
Bradi2g04847 10.0kb downstream 10.0kb downstream 23154 true Bd2: 3467155-3490308 Brachypodium distachyon
Bradi2g04847 10.0kb downstream 10.0kb downstream 10000 false Bd2: 3467155-3477154 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124581777 5269 Grass View MSA
122047840 5273 Angiosperm View MSA
123428903 5275 Viridiplantae View MSA
121310804 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.125        
cufflinks 12.215     High  
cufflinks 14.53     High  
cufflinks 9.42        
cufflinks 4.033        
cufflinks 11.487     High  
cufflinks 10.323     High  
cufflinks 9.542     High  
cufflinks 10.103     High  
cufflinks 5.153        
cufflinks 0.092       Low
cufflinks 14.746     High  
cufflinks 1.013        
cufflinks 0.097       Low
cufflinks 5.876        
cufflinks 12.245     High  
cufflinks 5.107        
cufflinks 6.223        
cufflinks 5.833        
cufflinks 0.626       Low
cufflinks 4.701        
cufflinks 13.17     High  
cufflinks 10.383     High  
cufflinks 11.543     High  
cufflinks 7.584        
cufflinks 11.587     High  
cufflinks 0.323       Low
cufflinks 8.587        
cufflinks 10.266        
cufflinks 22.766     High High

0 Strain