Gene : Bradi2g05190 B. distachyon v3.1
Defline:  (1 of 1) PTHR31791:SF10 - FRIGIDA-LIKE PROTEIN 1-RELATED Genomic Order:  673
Name:  ? Bradi2g05190 Secondary Identifier:  ? PAC:32773794
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g05190 0.5kb upstream 0.5kb upstream 5892 true Bd2: 3758158-3764049 Brachypodium distachyon
Bradi2g05190 0.5kb upstream 0.5kb upstream 500 false Bd2: 3763550-3764049 Brachypodium distachyon
Bradi2g05190 0.5kb downstream 0.5kb downstream 5892 true Bd2: 3757658-3763549 Brachypodium distachyon
Bradi2g05190 0.5kb downstream 0.5kb downstream 500 false Bd2: 3757658-3758157 Brachypodium distachyon
Bradi2g05190 1.0kb upstream 1.0kb upstream 6392 true Bd2: 3758158-3764549 Brachypodium distachyon
Bradi2g05190 1.0kb upstream 1.0kb upstream 1000 false Bd2: 3763550-3764549 Brachypodium distachyon
Bradi2g05190 1.0kb downstream 1.0kb downstream 6392 true Bd2: 3757158-3763549 Brachypodium distachyon
Bradi2g05190 1.0kb downstream 1.0kb downstream 1000 false Bd2: 3757158-3758157 Brachypodium distachyon
Bradi2g05190 2.0kb upstream 2.0kb upstream 7392 true Bd2: 3758158-3765549 Brachypodium distachyon
Bradi2g05190 2.0kb upstream 2.0kb upstream 2000 false Bd2: 3763550-3765549 Brachypodium distachyon
Bradi2g05190 2.0kb downstream 2.0kb downstream 7392 true Bd2: 3756158-3763549 Brachypodium distachyon
Bradi2g05190 2.0kb downstream 2.0kb downstream 2000 false Bd2: 3756158-3758157 Brachypodium distachyon
Bradi2g05190 5.0kb upstream 5.0kb upstream 10392 true Bd2: 3758158-3768549 Brachypodium distachyon
Bradi2g05190 5.0kb upstream 5.0kb upstream 5000 false Bd2: 3763550-3768549 Brachypodium distachyon
Bradi2g05190 5.0kb downstream 5.0kb downstream 10392 true Bd2: 3753158-3763549 Brachypodium distachyon
Bradi2g05190 5.0kb downstream 5.0kb downstream 5000 false Bd2: 3753158-3758157 Brachypodium distachyon
Bradi2g05190 10.0kb upstream 10.0kb upstream 15392 true Bd2: 3758158-3773549 Brachypodium distachyon
Bradi2g05190 10.0kb upstream 10.0kb upstream 10000 false Bd2: 3763550-3773549 Brachypodium distachyon
Bradi2g05190 10.0kb downstream 10.0kb downstream 15392 true Bd2: 3748158-3763549 Brachypodium distachyon
Bradi2g05190 10.0kb downstream 10.0kb downstream 10000 false Bd2: 3748158-3758157 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578983 5269 Grass View MSA
122049727 5273 Angiosperm View MSA
121311561 5274 Embryophyte View MSA
123348841 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.226        
cufflinks 3.945        
cufflinks 3.585        
cufflinks 3.411        
cufflinks 1.351        
cufflinks 3.614        
cufflinks 3.78        
cufflinks 3.327        
cufflinks 3.541        
cufflinks 2.089        
cufflinks 1.359        
cufflinks 3.238        
cufflinks 1.289        
cufflinks 1.331        
cufflinks 1.739        
cufflinks 4.24        
cufflinks 3.032        
cufflinks 5.652       High
cufflinks 1.975        
cufflinks 0.185       Low
cufflinks 2.736        
cufflinks 2.955        
cufflinks 2.947        
cufflinks 2.674        
cufflinks 3.06        
cufflinks 2.475        
cufflinks 1.523        
cufflinks 2.51        
cufflinks 2.468        
cufflinks 5.138       High

0 Strain