Gene : Bradi2g05226 B. distachyon v3.1
Defline:  (1 of 1) PTHR36319:SF1 - PROTEIN GIGANTEA Genomic Order:  683
Name:  ? Bradi2g05226 Secondary Identifier:  ? PAC:32776210
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g05226 0.5kb upstream 0.5kb upstream 9210 true Bd2: 3810295-3819504 Brachypodium distachyon
Bradi2g05226 0.5kb upstream 0.5kb upstream 500 false Bd2: 3819005-3819504 Brachypodium distachyon
Bradi2g05226 0.5kb downstream 0.5kb downstream 9210 true Bd2: 3809795-3819004 Brachypodium distachyon
Bradi2g05226 0.5kb downstream 0.5kb downstream 500 false Bd2: 3809795-3810294 Brachypodium distachyon
Bradi2g05226 1.0kb upstream 1.0kb upstream 9710 true Bd2: 3810295-3820004 Brachypodium distachyon
Bradi2g05226 1.0kb upstream 1.0kb upstream 1000 false Bd2: 3819005-3820004 Brachypodium distachyon
Bradi2g05226 1.0kb downstream 1.0kb downstream 9710 true Bd2: 3809295-3819004 Brachypodium distachyon
Bradi2g05226 1.0kb downstream 1.0kb downstream 1000 false Bd2: 3809295-3810294 Brachypodium distachyon
Bradi2g05226 2.0kb upstream 2.0kb upstream 10710 true Bd2: 3810295-3821004 Brachypodium distachyon
Bradi2g05226 2.0kb upstream 2.0kb upstream 2000 false Bd2: 3819005-3821004 Brachypodium distachyon
Bradi2g05226 2.0kb downstream 2.0kb downstream 10710 true Bd2: 3808295-3819004 Brachypodium distachyon
Bradi2g05226 2.0kb downstream 2.0kb downstream 2000 false Bd2: 3808295-3810294 Brachypodium distachyon
Bradi2g05226 5.0kb upstream 5.0kb upstream 13710 true Bd2: 3810295-3824004 Brachypodium distachyon
Bradi2g05226 5.0kb upstream 5.0kb upstream 5000 false Bd2: 3819005-3824004 Brachypodium distachyon
Bradi2g05226 5.0kb downstream 5.0kb downstream 13710 true Bd2: 3805295-3819004 Brachypodium distachyon
Bradi2g05226 5.0kb downstream 5.0kb downstream 5000 false Bd2: 3805295-3810294 Brachypodium distachyon
Bradi2g05226 10.0kb upstream 10.0kb upstream 18710 true Bd2: 3810295-3829004 Brachypodium distachyon
Bradi2g05226 10.0kb upstream 10.0kb upstream 10000 false Bd2: 3819005-3829004 Brachypodium distachyon
Bradi2g05226 10.0kb downstream 10.0kb downstream 18710 true Bd2: 3800295-3819004 Brachypodium distachyon
Bradi2g05226 10.0kb downstream 10.0kb downstream 10000 false Bd2: 3800295-3810294 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580522 5269 Grass View MSA
122046361 5273 Angiosperm View MSA
121310594 5274 Embryophyte View MSA
123348039 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.239     High  
cufflinks 97.832     High High
cufflinks 0.772       Low
cufflinks 29.145     High  
cufflinks 7.712        
cufflinks 69.356     High  
cufflinks 105.723     High High
cufflinks 5.886        
cufflinks 23.627     High  
cufflinks 0.274       Low
cufflinks 24.582     High  
cufflinks 30.673     High  
cufflinks 31.918     High  
cufflinks 17.487     High  
cufflinks 4.336        
cufflinks 61.909     High  
cufflinks 9.707        
cufflinks 70.176     High  
cufflinks 24.465     High  
cufflinks 7.536        
cufflinks 18.055     High  
cufflinks 0.502       Low
cufflinks 7.577        
cufflinks 22.474     High  
cufflinks 45.635     High  
cufflinks 0.234       Low
cufflinks 29.358     High  
cufflinks 0.184       Low
cufflinks 0.219       Low
cufflinks 52.421     High  

0 Strain