Gene : Bradi2g05420 B. distachyon v3.1
Defline:  (1 of 1) PTHR21148:SF1 - PHOSDUCIN-LIKE PROTEIN 3 Genomic Order:  703
Name:  ? Bradi2g05420 Secondary Identifier:  ? PAC:32780051
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g05420 0.5kb upstream 0.5kb upstream 3158 true Bd2: 3925743-3928900 Brachypodium distachyon
Bradi2g05420 0.5kb upstream 0.5kb upstream 500 false Bd2: 3928401-3928900 Brachypodium distachyon
Bradi2g05420 0.5kb downstream 0.5kb downstream 3158 true Bd2: 3925243-3928400 Brachypodium distachyon
Bradi2g05420 0.5kb downstream 0.5kb downstream 500 false Bd2: 3925243-3925742 Brachypodium distachyon
Bradi2g05420 1.0kb upstream 1.0kb upstream 3658 true Bd2: 3925743-3929400 Brachypodium distachyon
Bradi2g05420 1.0kb upstream 1.0kb upstream 1000 false Bd2: 3928401-3929400 Brachypodium distachyon
Bradi2g05420 1.0kb downstream 1.0kb downstream 3658 true Bd2: 3924743-3928400 Brachypodium distachyon
Bradi2g05420 1.0kb downstream 1.0kb downstream 1000 false Bd2: 3924743-3925742 Brachypodium distachyon
Bradi2g05420 2.0kb upstream 2.0kb upstream 4658 true Bd2: 3925743-3930400 Brachypodium distachyon
Bradi2g05420 2.0kb upstream 2.0kb upstream 2000 false Bd2: 3928401-3930400 Brachypodium distachyon
Bradi2g05420 2.0kb downstream 2.0kb downstream 4658 true Bd2: 3923743-3928400 Brachypodium distachyon
Bradi2g05420 2.0kb downstream 2.0kb downstream 2000 false Bd2: 3923743-3925742 Brachypodium distachyon
Bradi2g05420 5.0kb upstream 5.0kb upstream 7658 true Bd2: 3925743-3933400 Brachypodium distachyon
Bradi2g05420 5.0kb upstream 5.0kb upstream 5000 false Bd2: 3928401-3933400 Brachypodium distachyon
Bradi2g05420 5.0kb downstream 5.0kb downstream 7658 true Bd2: 3920743-3928400 Brachypodium distachyon
Bradi2g05420 5.0kb downstream 5.0kb downstream 5000 false Bd2: 3920743-3925742 Brachypodium distachyon
Bradi2g05420 10.0kb upstream 10.0kb upstream 12658 true Bd2: 3925743-3938400 Brachypodium distachyon
Bradi2g05420 10.0kb upstream 10.0kb upstream 10000 false Bd2: 3928401-3938400 Brachypodium distachyon
Bradi2g05420 10.0kb downstream 10.0kb downstream 12658 true Bd2: 3915743-3928400 Brachypodium distachyon
Bradi2g05420 10.0kb downstream 10.0kb downstream 10000 false Bd2: 3915743-3925742 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573104 5269 Grass View MSA
122042488 5273 Angiosperm View MSA
121344718 5274 Embryophyte View MSA
123424986 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.505     High  
cufflinks 11.638     High  
cufflinks 10.987     High  
cufflinks 13.944     High  
cufflinks 15.405     High  
cufflinks 10.173     High  
cufflinks 11.747     High  
cufflinks 8.626       Low
cufflinks 9.667     High  
cufflinks 14.676     High  
cufflinks 7.114       Low
cufflinks 8.4       Low
cufflinks 6.094       Low
cufflinks 6.811       Low
cufflinks 11.36     High  
cufflinks 9.733     High  
cufflinks 17.132     High  
cufflinks 16.687     High  
cufflinks 19.39     High High
cufflinks 18.18     High  
cufflinks 26.206     High High
cufflinks 9.349        
cufflinks 9.016        
cufflinks 10.38     High  
cufflinks 12.871     High  
cufflinks 13.681     High  
cufflinks 7.261       Low
cufflinks 14.794     High  
cufflinks 13.827     High  
cufflinks 17.87     High  

0 Strain