Gene : Bradi2g05660 B. distachyon v3.1
Defline:  (1 of 2) K02739 - 20S proteasome subunit beta 2 (PSMB7) Genomic Order:  728
Name:  ? Bradi2g05660 Secondary Identifier:  ? PAC:32780958
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g05660 0.5kb upstream 0.5kb upstream 4576 true Bd2: 4145801-4150376 Brachypodium distachyon
Bradi2g05660 0.5kb upstream 0.5kb upstream 500 false Bd2: 4145801-4146300 Brachypodium distachyon
Bradi2g05660 0.5kb downstream 0.5kb downstream 4576 true Bd2: 4146301-4150876 Brachypodium distachyon
Bradi2g05660 0.5kb downstream 0.5kb downstream 500 false Bd2: 4150377-4150876 Brachypodium distachyon
Bradi2g05660 1.0kb upstream 1.0kb upstream 5076 true Bd2: 4145301-4150376 Brachypodium distachyon
Bradi2g05660 1.0kb upstream 1.0kb upstream 1000 false Bd2: 4145301-4146300 Brachypodium distachyon
Bradi2g05660 1.0kb downstream 1.0kb downstream 5076 true Bd2: 4146301-4151376 Brachypodium distachyon
Bradi2g05660 1.0kb downstream 1.0kb downstream 1000 false Bd2: 4150377-4151376 Brachypodium distachyon
Bradi2g05660 2.0kb upstream 2.0kb upstream 6076 true Bd2: 4144301-4150376 Brachypodium distachyon
Bradi2g05660 2.0kb upstream 2.0kb upstream 2000 false Bd2: 4144301-4146300 Brachypodium distachyon
Bradi2g05660 2.0kb downstream 2.0kb downstream 6076 true Bd2: 4146301-4152376 Brachypodium distachyon
Bradi2g05660 2.0kb downstream 2.0kb downstream 2000 false Bd2: 4150377-4152376 Brachypodium distachyon
Bradi2g05660 5.0kb upstream 5.0kb upstream 9076 true Bd2: 4141301-4150376 Brachypodium distachyon
Bradi2g05660 5.0kb upstream 5.0kb upstream 5000 false Bd2: 4141301-4146300 Brachypodium distachyon
Bradi2g05660 5.0kb downstream 5.0kb downstream 9076 true Bd2: 4146301-4155376 Brachypodium distachyon
Bradi2g05660 5.0kb downstream 5.0kb downstream 5000 false Bd2: 4150377-4155376 Brachypodium distachyon
Bradi2g05660 10.0kb upstream 10.0kb upstream 14076 true Bd2: 4136301-4150376 Brachypodium distachyon
Bradi2g05660 10.0kb upstream 10.0kb upstream 10000 false Bd2: 4136301-4146300 Brachypodium distachyon
Bradi2g05660 10.0kb downstream 10.0kb downstream 14076 true Bd2: 4146301-4160376 Brachypodium distachyon
Bradi2g05660 10.0kb downstream 10.0kb downstream 10000 false Bd2: 4150377-4160376 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124587579 5269 Grass View MSA
122044659 5273 Angiosperm View MSA
121345810 5274 Embryophyte View MSA
123428515 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.044     High  
cufflinks 11.295     High  
cufflinks 10.966     High  
cufflinks 14.018     High  
cufflinks 11.034     High  
cufflinks 10.239     High  
cufflinks 11.287     High  
cufflinks 9.927     High  
cufflinks 9.743     High  
cufflinks 12.687     High  
cufflinks 9.023     High Low
cufflinks 9.649     High  
cufflinks 7.594     High Low
cufflinks 8.656     High Low
cufflinks 13.276     High  
cufflinks 9.886     High  
cufflinks 15.224     High High
cufflinks 13.449     High  
cufflinks 17.026     High High
cufflinks 7.545       Low
cufflinks 18.068     High High
cufflinks 8.834       Low
cufflinks 9.738     High  
cufflinks 11.726     High  
cufflinks 11.748     High  
cufflinks 12.586     High  
cufflinks 9.342     High Low
cufflinks 12.527     High  
cufflinks 10.901     High  
cufflinks 13.242     High  

0 Strain