Gene : Bradi2g06080 B. distachyon v3.1
Defline:  (1 of 2) K02988 - small subunit ribosomal protein S5 (RP-S5, MRPS5, rpsE) Genomic Order:  781
Name:  ? Bradi2g06080 Secondary Identifier:  ? PAC:32772747
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g06080 0.5kb upstream 0.5kb upstream 5776 true Bd2: 4568824-4574599 Brachypodium distachyon
Bradi2g06080 0.5kb upstream 0.5kb upstream 500 false Bd2: 4574100-4574599 Brachypodium distachyon
Bradi2g06080 0.5kb downstream 0.5kb downstream 5776 true Bd2: 4568324-4574099 Brachypodium distachyon
Bradi2g06080 0.5kb downstream 0.5kb downstream 500 false Bd2: 4568324-4568823 Brachypodium distachyon
Bradi2g06080 1.0kb upstream 1.0kb upstream 6276 true Bd2: 4568824-4575099 Brachypodium distachyon
Bradi2g06080 1.0kb upstream 1.0kb upstream 1000 false Bd2: 4574100-4575099 Brachypodium distachyon
Bradi2g06080 1.0kb downstream 1.0kb downstream 6276 true Bd2: 4567824-4574099 Brachypodium distachyon
Bradi2g06080 1.0kb downstream 1.0kb downstream 1000 false Bd2: 4567824-4568823 Brachypodium distachyon
Bradi2g06080 2.0kb upstream 2.0kb upstream 7276 true Bd2: 4568824-4576099 Brachypodium distachyon
Bradi2g06080 2.0kb upstream 2.0kb upstream 2000 false Bd2: 4574100-4576099 Brachypodium distachyon
Bradi2g06080 2.0kb downstream 2.0kb downstream 7276 true Bd2: 4566824-4574099 Brachypodium distachyon
Bradi2g06080 2.0kb downstream 2.0kb downstream 2000 false Bd2: 4566824-4568823 Brachypodium distachyon
Bradi2g06080 5.0kb upstream 5.0kb upstream 10276 true Bd2: 4568824-4579099 Brachypodium distachyon
Bradi2g06080 5.0kb upstream 5.0kb upstream 5000 false Bd2: 4574100-4579099 Brachypodium distachyon
Bradi2g06080 5.0kb downstream 5.0kb downstream 10276 true Bd2: 4563824-4574099 Brachypodium distachyon
Bradi2g06080 5.0kb downstream 5.0kb downstream 5000 false Bd2: 4563824-4568823 Brachypodium distachyon
Bradi2g06080 10.0kb upstream 10.0kb upstream 15276 true Bd2: 4568824-4584099 Brachypodium distachyon
Bradi2g06080 10.0kb upstream 10.0kb upstream 10000 false Bd2: 4574100-4584099 Brachypodium distachyon
Bradi2g06080 10.0kb downstream 10.0kb downstream 15276 true Bd2: 4558824-4574099 Brachypodium distachyon
Bradi2g06080 10.0kb downstream 10.0kb downstream 10000 false Bd2: 4558824-4568823 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124584132 5269 Grass View MSA
122046027 5273 Angiosperm View MSA
121345659 5274 Embryophyte View MSA
123426333 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 61.272     High  
cufflinks 70.441     High  
cufflinks 67.07     High  
cufflinks 65.395     High  
cufflinks 56.258     High  
cufflinks 57.547     High  
cufflinks 74.515     High  
cufflinks 56.903     High  
cufflinks 50.363     High  
cufflinks 64.93     High  
cufflinks 39.868     High  
cufflinks 47.365     High  
cufflinks 36.285     High  
cufflinks 35.414     High  
cufflinks 48.023     High  
cufflinks 68.555     High  
cufflinks 67.506     High  
cufflinks 4.488       Low
cufflinks 52.354     High  
cufflinks 5.925       Low
cufflinks 37.636     High  
cufflinks 56.875     High  
cufflinks 49.113     High  
cufflinks 46.738     High  
cufflinks 52.941     High  
cufflinks 63.15     High  
cufflinks 23.9     High  
cufflinks 62.972     High  
cufflinks 63.018     High  
cufflinks 56.105     High  

0 Strain