Gene : Bradi2g06570 B. distachyon v3.1
Defline:  (1 of 2) PTHR31104:SF1 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K15M2 Genomic Order:  840
Name:  ? Bradi2g06570 Secondary Identifier:  ? PAC:32774295
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g06570 0.5kb upstream 0.5kb upstream 2752 true Bd2: 5015952-5018703 Brachypodium distachyon
Bradi2g06570 0.5kb upstream 0.5kb upstream 500 false Bd2: 5018204-5018703 Brachypodium distachyon
Bradi2g06570 0.5kb downstream 0.5kb downstream 2752 true Bd2: 5015452-5018203 Brachypodium distachyon
Bradi2g06570 0.5kb downstream 0.5kb downstream 500 false Bd2: 5015452-5015951 Brachypodium distachyon
Bradi2g06570 1.0kb upstream 1.0kb upstream 3252 true Bd2: 5015952-5019203 Brachypodium distachyon
Bradi2g06570 1.0kb upstream 1.0kb upstream 1000 false Bd2: 5018204-5019203 Brachypodium distachyon
Bradi2g06570 1.0kb downstream 1.0kb downstream 3252 true Bd2: 5014952-5018203 Brachypodium distachyon
Bradi2g06570 1.0kb downstream 1.0kb downstream 1000 false Bd2: 5014952-5015951 Brachypodium distachyon
Bradi2g06570 2.0kb upstream 2.0kb upstream 4252 true Bd2: 5015952-5020203 Brachypodium distachyon
Bradi2g06570 2.0kb upstream 2.0kb upstream 2000 false Bd2: 5018204-5020203 Brachypodium distachyon
Bradi2g06570 2.0kb downstream 2.0kb downstream 4252 true Bd2: 5013952-5018203 Brachypodium distachyon
Bradi2g06570 2.0kb downstream 2.0kb downstream 2000 false Bd2: 5013952-5015951 Brachypodium distachyon
Bradi2g06570 5.0kb upstream 5.0kb upstream 7252 true Bd2: 5015952-5023203 Brachypodium distachyon
Bradi2g06570 5.0kb upstream 5.0kb upstream 5000 false Bd2: 5018204-5023203 Brachypodium distachyon
Bradi2g06570 5.0kb downstream 5.0kb downstream 7252 true Bd2: 5010952-5018203 Brachypodium distachyon
Bradi2g06570 5.0kb downstream 5.0kb downstream 5000 false Bd2: 5010952-5015951 Brachypodium distachyon
Bradi2g06570 10.0kb upstream 10.0kb upstream 12252 true Bd2: 5015952-5028203 Brachypodium distachyon
Bradi2g06570 10.0kb upstream 10.0kb upstream 10000 false Bd2: 5018204-5028203 Brachypodium distachyon
Bradi2g06570 10.0kb downstream 10.0kb downstream 12252 true Bd2: 5005952-5018203 Brachypodium distachyon
Bradi2g06570 10.0kb downstream 10.0kb downstream 10000 false Bd2: 5005952-5015951 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124545829 5269 Grass View MSA
122047638 5273 Angiosperm View MSA
121344579 5274 Embryophyte View MSA
123380069 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.041        
cufflinks 1.756        
cufflinks 2.161        
cufflinks 1.362        
cufflinks 1.635        
cufflinks 1.671        
cufflinks 1.815        
cufflinks 1.547        
cufflinks 1.456        
cufflinks 1.903        
cufflinks 0.321       Low
cufflinks 1.517        
cufflinks 0.347       Low
cufflinks 0.319       Low
cufflinks 0.674        
cufflinks 1.494        
cufflinks 1.633        
cufflinks 9.023       High
cufflinks 2.657        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.876       High
cufflinks 1.928        
cufflinks 1.783        
cufflinks 1.646        
cufflinks 1.34        
cufflinks 2.22        
cufflinks 0.824        
cufflinks 2.189        
cufflinks 1.749        
cufflinks 3.078        

0 Strain