Gene : Bradi2g11900 B. distachyon v3.1
Defline:  (1 of 1) 2.3.1.168 - Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase / Dihydrolipoyl transacylase Genomic Order:  1544
Name:  ? Bradi2g11900 Secondary Identifier:  ? PAC:32772798
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-5046 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g11900 0.5kb upstream 0.5kb upstream 5553 true Bd2: 10217109-10222661 Brachypodium distachyon
Bradi2g11900 0.5kb upstream 0.5kb upstream 500 false Bd2: 10222162-10222661 Brachypodium distachyon
Bradi2g11900 0.5kb downstream 0.5kb downstream 5553 true Bd2: 10216609-10222161 Brachypodium distachyon
Bradi2g11900 0.5kb downstream 0.5kb downstream 500 false Bd2: 10216609-10217108 Brachypodium distachyon
Bradi2g11900 1.0kb upstream 1.0kb upstream 6053 true Bd2: 10217109-10223161 Brachypodium distachyon
Bradi2g11900 1.0kb upstream 1.0kb upstream 1000 false Bd2: 10222162-10223161 Brachypodium distachyon
Bradi2g11900 1.0kb downstream 1.0kb downstream 6053 true Bd2: 10216109-10222161 Brachypodium distachyon
Bradi2g11900 1.0kb downstream 1.0kb downstream 1000 false Bd2: 10216109-10217108 Brachypodium distachyon
Bradi2g11900 2.0kb upstream 2.0kb upstream 7053 true Bd2: 10217109-10224161 Brachypodium distachyon
Bradi2g11900 2.0kb upstream 2.0kb upstream 2000 false Bd2: 10222162-10224161 Brachypodium distachyon
Bradi2g11900 2.0kb downstream 2.0kb downstream 7053 true Bd2: 10215109-10222161 Brachypodium distachyon
Bradi2g11900 2.0kb downstream 2.0kb downstream 2000 false Bd2: 10215109-10217108 Brachypodium distachyon
Bradi2g11900 5.0kb upstream 5.0kb upstream 10053 true Bd2: 10217109-10227161 Brachypodium distachyon
Bradi2g11900 5.0kb upstream 5.0kb upstream 5000 false Bd2: 10222162-10227161 Brachypodium distachyon
Bradi2g11900 5.0kb downstream 5.0kb downstream 10053 true Bd2: 10212109-10222161 Brachypodium distachyon
Bradi2g11900 5.0kb downstream 5.0kb downstream 5000 false Bd2: 10212109-10217108 Brachypodium distachyon
Bradi2g11900 10.0kb upstream 10.0kb upstream 15053 true Bd2: 10217109-10232161 Brachypodium distachyon
Bradi2g11900 10.0kb upstream 10.0kb upstream 10000 false Bd2: 10222162-10232161 Brachypodium distachyon
Bradi2g11900 10.0kb downstream 10.0kb downstream 15053 true Bd2: 10207109-10222161 Brachypodium distachyon
Bradi2g11900 10.0kb downstream 10.0kb downstream 10000 false Bd2: 10207109-10217108 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572328 5269 Grass View MSA
122046167 5273 Angiosperm View MSA
121344663 5274 Embryophyte View MSA
123425518 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.447        
cufflinks 4.027        
cufflinks 6.01        
cufflinks 3.521        
cufflinks 11.298     High High
cufflinks 2.847        
cufflinks 3.157        
cufflinks 3.115        
cufflinks 2.67        
cufflinks 3.592        
cufflinks 1.239       Low
cufflinks 2.788        
cufflinks 1.349       Low
cufflinks 1.319       Low
cufflinks 2.56        
cufflinks 3.083        
cufflinks 3.114        
cufflinks 9.943       High
cufflinks 12.47       High
cufflinks 20.209     High High
cufflinks 4.472        
cufflinks 4.558        
cufflinks 3.321        
cufflinks 2.609        
cufflinks 2.49        
cufflinks 6.784        
cufflinks 1.578       Low
cufflinks 6.525        
cufflinks 4.73        
cufflinks 5.561        

0 Strain