Gene : Bradi5g01730 B. distachyon v3.1
Defline:  (1 of 1) 1.3.1.89 - tRNA-dihydrouridine(47) synthase (NAD(P)(+)) / tRNA-dihydrouridine synthase 3 Genomic Order:  168
Name:  ? Bradi5g01730 Secondary Identifier:  ? PAC:32809670
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g01730 0.5kb upstream 0.5kb upstream 10001 true Bd5: 1760230-1770230 Brachypodium distachyon
Bradi5g01730 0.5kb upstream 0.5kb upstream 500 false Bd5: 1769731-1770230 Brachypodium distachyon
Bradi5g01730 0.5kb downstream 0.5kb downstream 10001 true Bd5: 1759730-1769730 Brachypodium distachyon
Bradi5g01730 0.5kb downstream 0.5kb downstream 500 false Bd5: 1759730-1760229 Brachypodium distachyon
Bradi5g01730 1.0kb upstream 1.0kb upstream 10501 true Bd5: 1760230-1770730 Brachypodium distachyon
Bradi5g01730 1.0kb upstream 1.0kb upstream 1000 false Bd5: 1769731-1770730 Brachypodium distachyon
Bradi5g01730 1.0kb downstream 1.0kb downstream 10501 true Bd5: 1759230-1769730 Brachypodium distachyon
Bradi5g01730 1.0kb downstream 1.0kb downstream 1000 false Bd5: 1759230-1760229 Brachypodium distachyon
Bradi5g01730 2.0kb upstream 2.0kb upstream 11501 true Bd5: 1760230-1771730 Brachypodium distachyon
Bradi5g01730 2.0kb upstream 2.0kb upstream 2000 false Bd5: 1769731-1771730 Brachypodium distachyon
Bradi5g01730 2.0kb downstream 2.0kb downstream 11501 true Bd5: 1758230-1769730 Brachypodium distachyon
Bradi5g01730 2.0kb downstream 2.0kb downstream 2000 false Bd5: 1758230-1760229 Brachypodium distachyon
Bradi5g01730 5.0kb upstream 5.0kb upstream 14501 true Bd5: 1760230-1774730 Brachypodium distachyon
Bradi5g01730 5.0kb upstream 5.0kb upstream 5000 false Bd5: 1769731-1774730 Brachypodium distachyon
Bradi5g01730 5.0kb downstream 5.0kb downstream 14501 true Bd5: 1755230-1769730 Brachypodium distachyon
Bradi5g01730 5.0kb downstream 5.0kb downstream 5000 false Bd5: 1755230-1760229 Brachypodium distachyon
Bradi5g01730 10.0kb upstream 10.0kb upstream 19501 true Bd5: 1760230-1779730 Brachypodium distachyon
Bradi5g01730 10.0kb upstream 10.0kb upstream 10000 false Bd5: 1769731-1779730 Brachypodium distachyon
Bradi5g01730 10.0kb downstream 10.0kb downstream 19501 true Bd5: 1750230-1769730 Brachypodium distachyon
Bradi5g01730 10.0kb downstream 10.0kb downstream 10000 false Bd5: 1750230-1760229 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570026 5269 Grass View MSA
122047874 5273 Angiosperm View MSA
121343819 5274 Embryophyte View MSA
123428585 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.482        
cufflinks 3.522       High
cufflinks 2.958        
cufflinks 2.8        
cufflinks 1.588        
cufflinks 3.293        
cufflinks 3.251        
cufflinks 2.927        
cufflinks 3.0        
cufflinks 1.506        
cufflinks 2.585        
cufflinks 2.806        
cufflinks 1.441       Low
cufflinks 1.762        
cufflinks 1.635        
cufflinks 3.313        
cufflinks 2.379        
cufflinks 3.486       High
cufflinks 1.999        
cufflinks 0.777       Low
cufflinks 2.615        
cufflinks 2.395        
cufflinks 2.826        
cufflinks 2.862        
cufflinks 3.411       High
cufflinks 2.326        
cufflinks 1.925        
cufflinks 1.852        
cufflinks 1.963        
cufflinks 3.459       High

0 Strain