Gene : Bradi2g12627 B. distachyon v3.1
Defline:  (1 of 2) PTHR10159//PTHR10159:SF346 - DUAL SPECIFICITY PROTEIN PHOSPHATASE Genomic Order:  1637
Name:  ? Bradi2g12627 Secondary Identifier:  ? PAC:32777225
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g12627 0.5kb upstream 0.5kb upstream 8085 true Bd2: 10975469-10983553 Brachypodium distachyon
Bradi2g12627 0.5kb upstream 0.5kb upstream 500 false Bd2: 10975469-10975968 Brachypodium distachyon
Bradi2g12627 0.5kb downstream 0.5kb downstream 8085 true Bd2: 10975969-10984053 Brachypodium distachyon
Bradi2g12627 0.5kb downstream 0.5kb downstream 500 false Bd2: 10983554-10984053 Brachypodium distachyon
Bradi2g12627 1.0kb upstream 1.0kb upstream 8585 true Bd2: 10974969-10983553 Brachypodium distachyon
Bradi2g12627 1.0kb upstream 1.0kb upstream 1000 false Bd2: 10974969-10975968 Brachypodium distachyon
Bradi2g12627 1.0kb downstream 1.0kb downstream 8585 true Bd2: 10975969-10984553 Brachypodium distachyon
Bradi2g12627 1.0kb downstream 1.0kb downstream 1000 false Bd2: 10983554-10984553 Brachypodium distachyon
Bradi2g12627 2.0kb upstream 2.0kb upstream 9585 true Bd2: 10973969-10983553 Brachypodium distachyon
Bradi2g12627 2.0kb upstream 2.0kb upstream 2000 false Bd2: 10973969-10975968 Brachypodium distachyon
Bradi2g12627 2.0kb downstream 2.0kb downstream 9585 true Bd2: 10975969-10985553 Brachypodium distachyon
Bradi2g12627 2.0kb downstream 2.0kb downstream 2000 false Bd2: 10983554-10985553 Brachypodium distachyon
Bradi2g12627 5.0kb upstream 5.0kb upstream 12585 true Bd2: 10970969-10983553 Brachypodium distachyon
Bradi2g12627 5.0kb upstream 5.0kb upstream 5000 false Bd2: 10970969-10975968 Brachypodium distachyon
Bradi2g12627 5.0kb downstream 5.0kb downstream 12585 true Bd2: 10975969-10988553 Brachypodium distachyon
Bradi2g12627 5.0kb downstream 5.0kb downstream 5000 false Bd2: 10983554-10988553 Brachypodium distachyon
Bradi2g12627 10.0kb upstream 10.0kb upstream 17585 true Bd2: 10965969-10983553 Brachypodium distachyon
Bradi2g12627 10.0kb upstream 10.0kb upstream 10000 false Bd2: 10965969-10975968 Brachypodium distachyon
Bradi2g12627 10.0kb downstream 10.0kb downstream 17585 true Bd2: 10975969-10993553 Brachypodium distachyon
Bradi2g12627 10.0kb downstream 10.0kb downstream 10000 false Bd2: 10983554-10993553 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041294 5273 Angiosperm View MSA
124573244 5269 Grass View MSA
121347870 5274 Embryophyte View MSA
123426209 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.086       Low
cufflinks 0.302        
cufflinks 0.262        
cufflinks 0.288        
cufflinks 0.055     Low Low
cufflinks 0.3        
cufflinks 0.249        
cufflinks 0.241        
cufflinks 0.327        
cufflinks 0.189        
cufflinks 0.343        
cufflinks 0.246        
cufflinks 0.22        
cufflinks 0.235        
cufflinks 0.199        
cufflinks 0.252        
cufflinks 0.076     Low Low
cufflinks 0.178        
cufflinks 0.071     Low Low
cufflinks 0.027     Low Low
cufflinks 0.137        
cufflinks 0.233        
cufflinks 0.267        
cufflinks 0.297        
cufflinks 0.26        
cufflinks 0.254        
cufflinks 0.147        
cufflinks 0.248        
cufflinks 0.263        
cufflinks 0.184        

0 Strain