Gene : Bradi2g12720 B. distachyon v3.1
Defline:  (1 of 3) K08592 - sentrin-specific protease 1 [EC:3.4.22.68] (SENP1) Genomic Order:  1646
Name:  ? Bradi2g12720 Secondary Identifier:  ? PAC:32775494
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g12720 0.5kb upstream 0.5kb upstream 5263 true Bd2: 11100173-11105435 Brachypodium distachyon
Bradi2g12720 0.5kb upstream 0.5kb upstream 500 false Bd2: 11104936-11105435 Brachypodium distachyon
Bradi2g12720 0.5kb downstream 0.5kb downstream 5263 true Bd2: 11099673-11104935 Brachypodium distachyon
Bradi2g12720 0.5kb downstream 0.5kb downstream 500 false Bd2: 11099673-11100172 Brachypodium distachyon
Bradi2g12720 1.0kb upstream 1.0kb upstream 5763 true Bd2: 11100173-11105935 Brachypodium distachyon
Bradi2g12720 1.0kb upstream 1.0kb upstream 1000 false Bd2: 11104936-11105935 Brachypodium distachyon
Bradi2g12720 1.0kb downstream 1.0kb downstream 5763 true Bd2: 11099173-11104935 Brachypodium distachyon
Bradi2g12720 1.0kb downstream 1.0kb downstream 1000 false Bd2: 11099173-11100172 Brachypodium distachyon
Bradi2g12720 2.0kb upstream 2.0kb upstream 6763 true Bd2: 11100173-11106935 Brachypodium distachyon
Bradi2g12720 2.0kb upstream 2.0kb upstream 2000 false Bd2: 11104936-11106935 Brachypodium distachyon
Bradi2g12720 2.0kb downstream 2.0kb downstream 6763 true Bd2: 11098173-11104935 Brachypodium distachyon
Bradi2g12720 2.0kb downstream 2.0kb downstream 2000 false Bd2: 11098173-11100172 Brachypodium distachyon
Bradi2g12720 5.0kb upstream 5.0kb upstream 9763 true Bd2: 11100173-11109935 Brachypodium distachyon
Bradi2g12720 5.0kb upstream 5.0kb upstream 5000 false Bd2: 11104936-11109935 Brachypodium distachyon
Bradi2g12720 5.0kb downstream 5.0kb downstream 9763 true Bd2: 11095173-11104935 Brachypodium distachyon
Bradi2g12720 5.0kb downstream 5.0kb downstream 5000 false Bd2: 11095173-11100172 Brachypodium distachyon
Bradi2g12720 10.0kb upstream 10.0kb upstream 14763 true Bd2: 11100173-11114935 Brachypodium distachyon
Bradi2g12720 10.0kb upstream 10.0kb upstream 10000 false Bd2: 11104936-11114935 Brachypodium distachyon
Bradi2g12720 10.0kb downstream 10.0kb downstream 14763 true Bd2: 11090173-11104935 Brachypodium distachyon
Bradi2g12720 10.0kb downstream 10.0kb downstream 10000 false Bd2: 11090173-11100172 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124585973 5269 Grass View MSA
122046617 5273 Angiosperm View MSA
121348677 5274 Embryophyte View MSA
123380965 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.716        
cufflinks 3.335        
cufflinks 6.249        
cufflinks 2.878        
cufflinks 3.69        
cufflinks 2.983        
cufflinks 3.048        
cufflinks 2.733       Low
cufflinks 3.035        
cufflinks 5.384        
cufflinks 4.233        
cufflinks 3.611        
cufflinks 2.99        
cufflinks 3.074        
cufflinks 3.171        
cufflinks 3.21        
cufflinks 3.086        
cufflinks 4.924        
cufflinks 8.531       High
cufflinks 6.575       High
cufflinks 4.366        
cufflinks 7.37       High
cufflinks 3.096        
cufflinks 2.943        
cufflinks 3.012        
cufflinks 6.34       High
cufflinks 4.265        
cufflinks 7.688       High
cufflinks 7.502       High
cufflinks 4.662        

0 Strain