Gene : Bradi2g13077 B. distachyon v3.1
Defline:  (1 of 1) PTHR22773:SF92 - NAD(P)H-QUINONE OXIDOREDUCTASE CHAIN 4, CHLOROPLASTIC Genomic Order:  1694
Name:  ? Bradi2g13077 Secondary Identifier:  ? PAC:32780342
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g13077 0.5kb upstream 0.5kb upstream 3293 true Bd2: 11495146-11498438 Brachypodium distachyon
Bradi2g13077 0.5kb upstream 0.5kb upstream 500 false Bd2: 11497939-11498438 Brachypodium distachyon
Bradi2g13077 0.5kb downstream 0.5kb downstream 3293 true Bd2: 11494646-11497938 Brachypodium distachyon
Bradi2g13077 0.5kb downstream 0.5kb downstream 500 false Bd2: 11494646-11495145 Brachypodium distachyon
Bradi2g13077 1.0kb upstream 1.0kb upstream 3793 true Bd2: 11495146-11498938 Brachypodium distachyon
Bradi2g13077 1.0kb upstream 1.0kb upstream 1000 false Bd2: 11497939-11498938 Brachypodium distachyon
Bradi2g13077 1.0kb downstream 1.0kb downstream 3793 true Bd2: 11494146-11497938 Brachypodium distachyon
Bradi2g13077 1.0kb downstream 1.0kb downstream 1000 false Bd2: 11494146-11495145 Brachypodium distachyon
Bradi2g13077 2.0kb upstream 2.0kb upstream 4793 true Bd2: 11495146-11499938 Brachypodium distachyon
Bradi2g13077 2.0kb upstream 2.0kb upstream 2000 false Bd2: 11497939-11499938 Brachypodium distachyon
Bradi2g13077 2.0kb downstream 2.0kb downstream 4793 true Bd2: 11493146-11497938 Brachypodium distachyon
Bradi2g13077 2.0kb downstream 2.0kb downstream 2000 false Bd2: 11493146-11495145 Brachypodium distachyon
Bradi2g13077 5.0kb upstream 5.0kb upstream 7793 true Bd2: 11495146-11502938 Brachypodium distachyon
Bradi2g13077 5.0kb upstream 5.0kb upstream 5000 false Bd2: 11497939-11502938 Brachypodium distachyon
Bradi2g13077 5.0kb downstream 5.0kb downstream 7793 true Bd2: 11490146-11497938 Brachypodium distachyon
Bradi2g13077 5.0kb downstream 5.0kb downstream 5000 false Bd2: 11490146-11495145 Brachypodium distachyon
Bradi2g13077 10.0kb upstream 10.0kb upstream 12793 true Bd2: 11495146-11507938 Brachypodium distachyon
Bradi2g13077 10.0kb upstream 10.0kb upstream 10000 false Bd2: 11497939-11507938 Brachypodium distachyon
Bradi2g13077 10.0kb downstream 10.0kb downstream 12793 true Bd2: 11485146-11497938 Brachypodium distachyon
Bradi2g13077 10.0kb downstream 10.0kb downstream 10000 false Bd2: 11485146-11495145 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124590182 5269 Grass View MSA
122049707 5273 Angiosperm View MSA
121351606 5274 Embryophyte View MSA
123428700 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.123        
cufflinks 0.117        
cufflinks 0.188        
cufflinks 0.113        
cufflinks 0.056     Low  
cufflinks 0.151        
cufflinks 0.127        
cufflinks 0.115        
cufflinks 0.081     Low  
cufflinks 0.131        
cufflinks 0.363       High
cufflinks 0.134        
cufflinks 0.279       High
cufflinks 0.336       High
cufflinks 0.221        
cufflinks 0.16        
cufflinks 0.015     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.024     Low Low
cufflinks 0.076     Low  
cufflinks 0.021     Low Low
cufflinks 0.306       High
cufflinks 0.211        
cufflinks 0.19        
cufflinks 0.204        
cufflinks 0.182        
cufflinks 0.205        
cufflinks 0.13        
cufflinks 0.336       High
cufflinks 0.064     Low  

0 Strain