Gene : Bradi2g13337 B. distachyon v3.1
Defline:  (1 of 1) PTHR13237:SF8 - SOMETHING ABOUT SILENCING PROTEIN 10 Genomic Order:  1740
Name:  ? Bradi2g13337 Secondary Identifier:  ? PAC:32775291
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g13337 0.5kb upstream 0.5kb upstream 10139 true Bd2: 11803318-11813456 Brachypodium distachyon
Bradi2g13337 0.5kb upstream 0.5kb upstream 500 false Bd2: 11803318-11803817 Brachypodium distachyon
Bradi2g13337 0.5kb downstream 0.5kb downstream 10139 true Bd2: 11803818-11813956 Brachypodium distachyon
Bradi2g13337 0.5kb downstream 0.5kb downstream 500 false Bd2: 11813457-11813956 Brachypodium distachyon
Bradi2g13337 1.0kb upstream 1.0kb upstream 10639 true Bd2: 11802818-11813456 Brachypodium distachyon
Bradi2g13337 1.0kb upstream 1.0kb upstream 1000 false Bd2: 11802818-11803817 Brachypodium distachyon
Bradi2g13337 1.0kb downstream 1.0kb downstream 10639 true Bd2: 11803818-11814456 Brachypodium distachyon
Bradi2g13337 1.0kb downstream 1.0kb downstream 1000 false Bd2: 11813457-11814456 Brachypodium distachyon
Bradi2g13337 2.0kb upstream 2.0kb upstream 11639 true Bd2: 11801818-11813456 Brachypodium distachyon
Bradi2g13337 2.0kb upstream 2.0kb upstream 2000 false Bd2: 11801818-11803817 Brachypodium distachyon
Bradi2g13337 2.0kb downstream 2.0kb downstream 11639 true Bd2: 11803818-11815456 Brachypodium distachyon
Bradi2g13337 2.0kb downstream 2.0kb downstream 2000 false Bd2: 11813457-11815456 Brachypodium distachyon
Bradi2g13337 5.0kb upstream 5.0kb upstream 14639 true Bd2: 11798818-11813456 Brachypodium distachyon
Bradi2g13337 5.0kb upstream 5.0kb upstream 5000 false Bd2: 11798818-11803817 Brachypodium distachyon
Bradi2g13337 5.0kb downstream 5.0kb downstream 14639 true Bd2: 11803818-11818456 Brachypodium distachyon
Bradi2g13337 5.0kb downstream 5.0kb downstream 5000 false Bd2: 11813457-11818456 Brachypodium distachyon
Bradi2g13337 10.0kb upstream 10.0kb upstream 19639 true Bd2: 11793818-11813456 Brachypodium distachyon
Bradi2g13337 10.0kb upstream 10.0kb upstream 10000 false Bd2: 11793818-11803817 Brachypodium distachyon
Bradi2g13337 10.0kb downstream 10.0kb downstream 19639 true Bd2: 11803818-11823456 Brachypodium distachyon
Bradi2g13337 10.0kb downstream 10.0kb downstream 10000 false Bd2: 11813457-11823456 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027842 5273 Angiosperm View MSA
124576572 5269 Grass View MSA
121344490 5274 Embryophyte View MSA
123424280 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.251        
cufflinks 1.387        
cufflinks 1.126        
cufflinks 1.107        
cufflinks 0.44       Low
cufflinks 1.264        
cufflinks 1.107        
cufflinks 0.825        
cufflinks 1.098        
cufflinks 0.654        
cufflinks 0.585        
cufflinks 0.898        
cufflinks 0.344       Low
cufflinks 0.392       Low
cufflinks 0.474        
cufflinks 1.35        
cufflinks 1.226        
cufflinks 2.794       High
cufflinks 0.884        
cufflinks 0.356       Low
cufflinks 1.035        
cufflinks 1.012        
cufflinks 0.807        
cufflinks 0.858        
cufflinks 1.219        
cufflinks 0.787        
cufflinks 0.454       Low
cufflinks 0.674        
cufflinks 0.673        
cufflinks 1.298        

0 Strain